Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02033 ATGGAGGAAGCACTTTTTAAGACGGTGAAGAAGAGCAAAGGTGAAATTATGGGTTCTTCTCCGGCAACATATTGTGTTACCGGAGCAACAGGGTATATTGGTTCATGGCTTGTGGAGGCTCTTCTTGAAAGAGGGTACACTGTTCATGCTACTGTTAGAGATCCTGAAAAGTCACTACACCTGTTGTCATTGTGGACAAGAGGTGACCGATTGAGAATTTTCAAGGCGGATTTGAATGAAGAAAGAAGTTTCGATGAGGCTGTGAAAGGCTGTGATGGCGTTTTTCATGTTGCAGCTTCAATGGAATTCAATGTGGTTCAGAAAGAAAACATCGAGGCCTGTGTTCAAGCAAATATAATTGATCCAGCAATAAAAGGAACCATAAACCTTCTAAAGTCCTGCTTGAATTCCAATTCTGTGAAAAGGGTTGTTTTCACATCTTCAATAAGTACCATCACTGCTAAAGATAGCAGTGGGAAGTGGAAACCTCTTGTTGATGAATCTTGCCAAATCCAAAGTGAACTTGTGTTGAAAACACAAGCAAGTGGGTGGGTTTATGCACTTTCAAAGCTTCTAACAGAAGAGGCAGCATTTAAGTTTGCAAAAGAGAATGGCATTGATCTTGTGTCAGTCATAACAGCCACTGTTGCTGGTCCATTCTTCACTGCTAGTGTACCATCAAGTGTTAAAGTCCTACTGTCACCAATAACAGGTGAACCTGAGTTCTTCAAGATATTATCTTCTGTAAATGCACGAATGGGGTCAATTGCTTTAGTTCACATTGAAGATATATGCAGTGCACACATATTCCTAATGGAGCATTCTAAAGCAGAAGGTCGATACATATGCAGCAGCCAAAGTTGTCCATTAGACATGTTGGCTAATCTTCTTGCCAAAGAGTATTCCTACTCAAGCAAGAAAAGGATTGCGGAGAAGAATTATGATAATGTTCCTTCTGAGATTTCCTCTAAGAAGTTAAAAGAGTTGGGTTTTAGTTACAAGCATGGGCTTGAAGACATAATCCATCAGACAATTATTTGTTGCCTAGATTATGGTTATTTACCTCCCATTAGACAATAG 1080 0.3981 MEEALFKTVKKSKGEIMGSSPATYCVTGATGYIGSWLVEALLERGYTVHATVRDPEKSLHLLSLWTRGDRLRIFKADLNEERSFDEAVKGCDGVFHVAASMEFNVVQKENIEACVQANIIDPAIKGTINLLKSCLNSNSVKRVVFTSSISTITAKDSSGKWKPLVDESCQIQSELVLKTQASGWVYALSKLLTEEAAFKFAKENGIDLVSVITATVAGPFFTASVPSSVKVLLSPITGEPEFFKILSSVNARMGSIALVHIEDICSAHIFLMEHSKAEGRYICSSQSCPLDMLANLLAKEYSYSSKKRIAEKNYDNVPSEISSKKLKELGFSYKHGLEDIIHQTIICCLDYGYLPPIRQ 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02033 359 CDD FR_SDR_e 24 331 - -
Gma12g02033 359 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 21 345 - -
Gma12g02033 359 Gene3D - 17 359 - -
Gma12g02033 359 Pfam NAD dependent epimerase/dehydratase family 25 277 IPR001509 -
Gma12g02033 359 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 21 345 - -
Gma12g02033 359 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 19 353 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02033 Gma-Chr12 40958757 40962842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g02033 15 345 Miscellaneous Gene Families AT4G27250 58.407 5.09e-134 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02033 - - gmx:100793923 706.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02033 12 40958757 40962842 Gma12g02033 12 40958757 40962842 ECH
Gma13g02524 13 40149199 40151731 Gma12g02033 12 40958757 40962842 GST