Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01889 ATGGCTTCTCACAGCGACGCCAATTCCTTGAGGGACTTTTGGATCCCGGGCCACGTTCTCGTGCCGGATTCCGTGGTTGAAGGAAGCAACATCGATATCGAAGGACCTAAGTGTCCGGTGCTCGTTTTCGTTAACTCAAGGAGTGGTGGCCAGCTAGGAGGAGAACTCTTGAAAACGTACCGTGCGCTTCTTAACGAAAACCAGGTTTTCGACTTGGGGGAAGAGGCtCCTGATAAGGTTCTGAGCAGGATCTATGCGAATTTGGAAAACCTCAGGCTTCAAGGCGATCATATTGCTATACAGATTATGGAGAAGTTGAGATTAATTGTTGCAGGGGGTGATGGAACAGCAGGCTGGCTACTTGGAGTTGTTTGTGATCTCAAATTATCTCATCCGCCACCCATTGCCACGGTTCCGTTGGGCACAGGGAATAATCTACCATTTGCATTTGGTTGGGGGAAGAAGAACCCAGGGACGGATGAACAGGCGGTCAAGTCATTTCTAGATCAAGTAATGAAAGCTAAGGAAATGAAAATAGACAACTGGCACATTCTTATGCGGATGAGGGCTCCAAAACAAGGTCCCTGTGATCCAATCCCTCCTCTTGAGTTACCACATTCTTTGCATGCCTTCCATCGTGTATCAGAGGCAGATGAACTTAATAAGGAAGGTTTCCATACTTTTCGTGGGGGATTTTGGAATTACTTCAGCATGGGAATGGATGCTCAAGTCTCTTATGCGTTTCATTCTGAACGAAAATTGCATCCTGAAAAATTCAAGAATCAGTTGGTCAATCAGAGTACTTATGCTAAGCTTGGATGCACACAAGGATGGTTTTTTGCTCCTCTGTTCCATCCTCCTTCCAGCAACATAGCACATCTTGCAAAAGTAAAAGTCATGAAAACGCATGGTGGTTGGGAAGACTTGCAAATTCCTTCCAGCATCAGGTCAATTGTATGCCTTAACTTGCCTAGCTTTTCTGGTGGATTGAATCCATGGGGTACACCAAACAAGATGAAGCGGCGTGATAGAGATTTGACACCTCCATATGTAGATGATGGCCTTATAGAGGTGGTTGGTTTTAGAGATGCCTGGCATGGGCTTGTTTTGCTTGCCCCAAATGGACATGGAACTCGCCTTGCTCAGGCACACAGAATCCGCTTTGAGTTTCACAAAGGTGCGGCAGAATATACATTCATGAGGATTGATGGGGAACCTTGGAAGCAACCCCTCCCAGTTGACGATGATACTGTTTTGGTGGAAATTTCTCACCATGGCCAGGTTAACATGCTCGCCACTCATGATTCCAAGTCCAAAAGTGAGAATGATCCGTCATCACCACACCATAATGATGTCGAGGAAGATGATAGTGATGATGAAGAAGCTAAAGCAGATGAATACCGGAAGTTTGGTGCGGCAGATACATTTAAAATCCCAGATGAGGTAGACCTTGCTCATCTTAGTTAG 1467 0.4574 MASHSDANSLRDFWIPGHVLVPDSVVEGSNIDIEGPKCPVLVFVNSRSGGQLGGELLKTYRALLNENQVFDLGEEAPDKVLSRIYANLENLRLQGDHIAIQIMEKLRLIVAGGDGTAGWLLGVVCDLKLSHPPPIATVPLGTGNNLPFAFGWGKKNPGTDEQAVKSFLDQVMKAKEMKIDNWHILMRMRAPKQGPCDPIPPLELPHSLHAFHRVSEADELNKEGFHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFKNQLVNQSTYAKLGCTQGWFFAPLFHPPSSNIAHLAKVKVMKTHGGWEDLQIPSSIRSIVCLNLPSFSGGLNPWGTPNKMKRRDRDLTPPYVDDGLIEVVGFRDAWHGLVLLAPNGHGTRLAQAHRIRFEFHKGAAEYTFMRIDGEPWKQPLPVDDDTVLVEISHHGQVNMLATHDSKSKSENDPSSPHHNDVEEDDSDDEEAKADEYRKFGAADTFKIPDEVDLAHLS 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01889 488 PANTHER DIACYLGLYCEROL KINASE 2 488 IPR037607 GO:0004143|GO:0007165
Gma12g01889 488 SMART dagk_c4b_2 234 406 IPR000756 GO:0004143|GO:0007205
Gma12g01889 488 SMART dagk_c4a_7 39 182 IPR001206 GO:0016301
Gma12g01889 488 Gene3D - 38 185 IPR017438 -
Gma12g01889 488 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 37 413 IPR016064 -
Gma12g01889 488 PIRSF DAG_kinase_plant 3 437 IPR016961 GO:0004143
Gma12g01889 488 MobiDBLite consensus disorder prediction 436 452 - -
Gma12g01889 488 Pfam Diacylglycerol kinase catalytic domain 39 168 IPR001206 GO:0016301
Gma12g01889 488 MobiDBLite consensus disorder prediction 433 470 - -
Gma12g01889 488 Gene3D - 231 414 - -
Gma12g01889 488 ProSiteProfiles DAG-kinase catalytic (DAGKc) domain profile. 35 188 IPR001206 GO:0016301
Gma12g01889 488 Pfam Diacylglycerol kinase accessory domain 232 406 IPR000756 GO:0004143|GO:0007205
Gma12g01889 488 PANTHER DIACYLGLYCEROL KINASE 2 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01889 Gma-Chr12 39554092 39560255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01889 4 481 Acyl Lipid Metabolism Gene Families AT2G20900 75.934 0.0 752
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01889 K00901 - gmx:100813809 1004.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01889 12 39554092 39560255 Gma12g01889 12 39554092 39560255 ECH
Gma13g02671 13 41415487 41422198 Gma12g01889 12 39554092 39560255 GST
Gma12g01889 12 39554092 39560255 Gma12g00950 12 9893491 9896472 PCT
Gma12g01889 12 39554092 39560255 Gma06g02668 06 50244850 50251273 PCT
Gma12g00950 12 9893491 9896472 Gma12g01889 12 39554092 39560255 PCT
Gma06g02668 06 50244850 50251273 Gma12g01889 12 39554092 39560255 PCT