Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01862 ATGGCTGTTACAGGACTTAGAGTTTCATCGTTTACAAGCTCACTTGCTTCATGCCCATCCATTTATCAACCATGGAACCTATCGTTACAGACATCTAAACGAGGGACGATTCATAATAACTTGTCCATCAAGTGCGTTGCTTTCAATGACAACAAGGTGCCCAGTCAAATTGATCTTCGGACAAACAATTTTGAGCAAGTTAAAAGAAACAGCCAAATGGCGTTGCTAAACTCAAGTGATCCAATCAAAATATTGAAGATGATTGACACCATCCAAAGGTTAGGAATTGAGCATCATTTCAAAGAAGAGATCAACGTACAACTTGGAAAGTTAGGAGATTGGGATGTCACTCAAGACCTCTTTGGCACAGCCCTTCAATTTCGCCTACAAAGACATAATGGCTGGCCTAGTTGTTCTGATGTTTTCAAGAAATTTTTGGACAAGAGTGGGACTTTCAAGGAATCAATCACCAATGACATTTGGGGTATGTTAAGTCTATACGAGGCATCATATTTAGGTGCAAAAGGTGAAGAAGTACTACAACAGGCCATGGACTTCTCCAAGGCTCATCTACACCAGTCACTGCCACACCTAAGTCCTGAACTACGAAAGCTTGTTGCCAAAGCCTTAACACTTCCAAGGCACCTAAGAATGGGTAGGTTAGAAGCCAGGAACTACATGGAAAAATATAGCCAAGCAACTAACCAAATACCTGCTCTTATGGAATTGGCAAAGTTAGACTTTGCCATGGTTCAATCAATGCACCAAAAAGAATTAGCAGAAATCTCCAGGTGGTGGAAAAACTTGGGACTTGTTGAAAGACTTGGCTTTGCCAGAGATAGACCAGCAGAGTGCTTCCTATGGACAGTGGGGACTTTTCCAGAACCACGCTATTCAAATTGTCGCATTGAACTTACAAAAACCATATGCATTTTGCTAGTTATGGATGATATTTTCGACACTTATGGCACATTAGAAGAACTTGTTCTTTTTACCGAGGCAATCAAAAGGTGGGATCTTGATGCGATGGAGCAATTGCCTGAATATATGAAGATATGCTATATGGCATTATTTAACACCACCCATGAAATTGCATATAAAATTCAAAAAGAGCACGGACAAACCGTTGTTGCTTGCTTGAAAAGAACATGGATAGACATATTTGAAGCTTTTCTAAAAGAAGCCAAATGGTTCAACAACGGATACATCCCAACTTTTAAGGAATATTTGGATAATGGGGTGATTTCTTCAGGATCATACATGGCCTTGGTGCATGCAACTTTTCTCATTGGGGATTCCCTATCAAAGGAAACCATTTCCATTATGAAGCCATACCCAAGGCTTTTCTCTTGCTCTGGGGAAATTCTTAGGCTTTGGGACGACTTGGGAACCTCAAGGGAGGAACAAGAAAGAGGAGACAATGCTTGCAGCATACAGTGTCTCATGACGGAGAATAATCTTTCAGATGAAAATGTTGCCAGGAAACATATAAGGCAACTAATACAAAACTTGTGGCCAGAGCTAAATGGTCTTGCTATGACCACAACCGCTCTGCCTTCGTCGGTTATGAAGGCTTCTCTTAACATGGCTAGAACTGCTCAGGTTATTTATCAACATGGAGATGATCAAAACACATTTACAGTTGATGATTATGTGAAAACATTGATCTTGACACCTTCTTCCAACTATTGA 1692 0.4048 MAVTGLRVSSFTSSLASCPSIYQPWNLSLQTSKRGTIHNNLSIKCVAFNDNKVPSQIDLRTNNFEQVKRNSQMALLNSSDPIKILKMIDTIQRLGIEHHFKEEINVQLGKLGDWDVTQDLFGTALQFRLQRHNGWPSCSDVFKKFLDKSGTFKESITNDIWGMLSLYEASYLGAKGEEVLQQAMDFSKAHLHQSLPHLSPELRKLVAKALTLPRHLRMGRLEARNYMEKYSQATNQIPALMELAKLDFAMVQSMHQKELAEISRWWKNLGLVERLGFARDRPAECFLWTVGTFPEPRYSNCRIELTKTICILLVMDDIFDTYGTLEELVLFTEAIKRWDLDAMEQLPEYMKICYMALFNTTHEIAYKIQKEHGQTVVACLKRTWIDIFEAFLKEAKWFNNGYIPTFKEYLDNGVISSGSYMALVHATFLIGDSLSKETISIMKPYPRLFSCSGEILRLWDDLGTSREEQERGDNACSIQCLMTENNLSDENVARKHIRQLIQNLWPELNGLAMTTTALPSSVMKASLNMARTAQVIYQHGDDQNTFTVDDYVKTLILTPSSNY 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01862 563 Gene3D - 79 236 IPR036965 GO:0010333|GO:0016829
Gma12g01862 563 Gene3D Farnesyl Diphosphate Synthase 61 545 IPR008949 -
Gma12g01862 563 CDD Terpene_cyclase_plant_C1 50 559 IPR044814 GO:0010333|GO:0016102
Gma12g01862 563 Pfam Terpene synthase, N-terminal domain 63 210 IPR001906 GO:0010333|GO:0016829
Gma12g01862 563 SFLD Isoprenoid Synthase Type I 239 559 - -
Gma12g01862 563 Pfam Terpene synthase family, metal binding domain 241 505 IPR005630 GO:0000287|GO:0010333|GO:0016829
Gma12g01862 563 PANTHER R-LINALOOL SYNTHASE PROTEIN-RELATED 51 559 - -
Gma12g01862 563 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 65 233 IPR008930 -
Gma12g01862 563 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Gma12g01862 563 SUPERFAMILY Terpenoid synthases 238 557 IPR008949 -
Gma12g01862 563 PANTHER OS04G0344100 PROTEIN-RELATED 51 559 - -
Gma12g01862 563 SFLD Terpene Cyclase Like 1 C Terminal Domain 239 559 IPR034741 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01862 Gma-Chr12 39255820 39259805 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01862 - - gmx:100807904 1141.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01862 12 39255820 39259805 Gma12g01862 12 39255820 39259805 ECH
Gma12g01862 12 39255820 39259805 Gma06g02695 06 50610259 50615459 PCT