Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01640 ATGTTTTGGAAGCTCGCATCCCTTTCTGCTTCCTCCCCCGTGGAGACAATATTAGACAAGGAGAATTTCACTTTGGAAGAGCTTCTGGACGAAGAGGAAGTGATCCAAGAATGCAAGGCCTTAAACAGTCGTCTTATCAACTTTCTGAGAGATCAAGCCCAGGTTGAGCAATTGTTACGATACATTATTGAAGAACCACCAGAAGATGCTGAAAATAAACGGGCCTTCAAGTTTCCATTCATTGCCTGCGAGATATTTACATGTGAAATTGATGTCATTTTGAAGACCTTGGTTGATGATGAAGAGCTGATGAACTTATTATTCTCTTTTTTGGAACCTAATCGCTCACATAGTACCTTGTTGGCTGGCTACTTTAGCAAGGTTGTTGTTTGCCTAATGATTCGAAAGACAGTGCCACTTATGAAATATGTTCAAGCCCATCAGAATGTTTTTCGCCAACTGGTTGATTTGATAGGAATTACATCCATTATGGAGGTTTTGGTTCGATTGGTAGGCGCTGATGACCATATGTATCACAATTTTATAGATGTGATGCAATGGTTGGCTGAGAGCAACCTGCTTGAGATGATTGTTCATAAATTGAGTCCATCTAGTCCTCCTGAAGTTCATGCCAACGCGGCTGAAACATTGTGCACAATAACTCGAAATCCCTCATCGACTCTAGCAATTAAACTTTCAAGCCCAAGTTTTGTTGCCAAAATTTTGGATCATGCACTGGAAGATTCACAATCAAAGTCTAGCCTTGTGAACTCACTTTCAGTGTGTGTTTCTTTATTGGATCCCAAAAGATCTGCTATATCATCTCCCCTTTTTCATTCATTTCGAAGTCAACACATGTATGAGCCACCCATTCCTGTAAACCCAGACACTATTGGTGCTATGCTACCTAAATTAAGCGAATTGCTTATGCTTTTGAATGTATCATCTGATGAAAAAGTATTGCCTACAACATATGGAGAATTGAGACCTCCACTCGGGAAGCATCGATTAAAGATTGTTGAGTTCATTGCTGTCCTTCTAAAAACTGGAAATGAAGTGGCAGAAAAAGAAATGGTCAATTCAGGAACCATTCAACGAGTCATTGACCTCTTCTTTGAGTATCCATATAATAACTCCTTACACCATCATGTAGAAAGTATCATATTATCTTGTTTGGAGAGCAAAACTAATGCCATTGTTGAACATCTTCTTCAAGAGTGTAATTTAATTGGAAGATTTCTCCAAGCAGACAAACGTTCTACTCTCTCTGCTGACATAAATATGCCAACAGTACCTGCTGCTGGAAAACAAGTGCCACGGGCAGGAAACATTGGGCATATTACTCGAATTGTTAACAAACTTGTTCACCTGGCTCATAATCGAAACCTCATACTGACATGTCTTCAGGAAAATAGTGAGTGGAATGAATGGCAAGCTTCAGTTCTTCAGGAGCGTAATGTGGTTGAGAATGTTCACCGTTGGGCTTGTGGACGTCCGACTGCTTTACAAGATAGGATGAGGGATAGTGATGATGATGAACTTCATGACAGAGACTATGATGTTGCAGCTCTAGCAAATAATTTGAACCAGGCTTTTAGATATAAAATTTATGGGAATGAGGATAACGAGGAGGAACGTGGCAACCTTGATCGAGATGATGAGGATGTCTACTTTGATAATGACTCTGCACAAGTAGTCATATCATCCCTCAGACTCAGTGACGATCAAGGGAGTAGTCTGTTTACAAACTCCAACTGGTTTGAATTCCAAGATGACAGAATTGGTGATGCAACTGGGGGAACAACATCATCGGAGATGATGGATGAGATAAACTTGAATGGTGCTGCAAATGGTGGCAACAGTAGTGATGATGAGGTAGTGGTTGGAGAGGATGAAGAATTGGATGAAAGCAAAAATAATCTGAATGGTACATCTAGCTCAAGCACAAACTTAAATGGAATAACTGGTAGTGATTCCATGAATGGAGACACCTTGAACTTTGAAAGCAAAAAGACAAGTGCTTCACATGATATGGGATTCTTCAGGTTTGAGGCATCGGACAATGAAGAGTTGTTTGGGGACAGGCCTTTGCCTGATTGGGTGGGATGGGGTGAACCTTCAGATATGCAAGATGCTGGATCAAGCAAGAACCCATTTATAGATCACGATGATTCTTCTGGTAGCAACCTTTGTACTACCAAACCTCAAATAGATAGCCCTACTCCGAGTCCTCCTTCAAATGGGGAATCTGTTCCTTCAAACAGGTCACCAACTAAAGAAGATTCGATTGATGGGGGTGTTGACTCGAGTCAAAGAGCAGTACCTGTACCATCGCTCTTCGAAGAAGATGTTGAATTTGTAGGTGTAGAATTAGAAGGTACTGAGAAGGCTATGGAACAGGCTCTGAAAGAAGGGATAGTTGGGGAGGCAGGACCATTGAAAAGAAACATGGTCTCTAAAGTGCCAGAAAAGGAAAGTACTGACGAGGGTGGTCCTGGAATAAAGGAATTCAATGATGCAAATTACTGGAGGGTTGACCAGGAGGTTGCTGTTCTAGAGTGA 2562 0.4118 MFWKLASLSASSPVETILDKENFTLEELLDEEEVIQECKALNSRLINFLRDQAQVEQLLRYIIEEPPEDAENKRAFKFPFIACEIFTCEIDVILKTLVDDEELMNLLFSFLEPNRSHSTLLAGYFSKVVVCLMIRKTVPLMKYVQAHQNVFRQLVDLIGITSIMEVLVRLVGADDHMYHNFIDVMQWLAESNLLEMIVHKLSPSSPPEVHANAAETLCTITRNPSSTLAIKLSSPSFVAKILDHALEDSQSKSSLVNSLSVCVSLLDPKRSAISSPLFHSFRSQHMYEPPIPVNPDTIGAMLPKLSELLMLLNVSSDEKVLPTTYGELRPPLGKHRLKIVEFIAVLLKTGNEVAEKEMVNSGTIQRVIDLFFEYPYNNSLHHHVESIILSCLESKTNAIVEHLLQECNLIGRFLQADKRSTLSADINMPTVPAAGKQVPRAGNIGHITRIVNKLVHLAHNRNLILTCLQENSEWNEWQASVLQERNVVENVHRWACGRPTALQDRMRDSDDDELHDRDYDVAALANNLNQAFRYKIYGNEDNEEERGNLDRDDEDVYFDNDSAQVVISSLRLSDDQGSSLFTNSNWFEFQDDRIGDATGGTTSSEMMDEINLNGAANGGNSSDDEVVVGEDEELDESKNNLNGTSSSSTNLNGITGSDSMNGDTLNFESKKTSASHDMGFFRFEASDNEELFGDRPLPDWVGWGEPSDMQDAGSSKNPFIDHDDSSGSNLCTTKPQIDSPTPSPPSNGESVPSNRSPTKEDSIDGGVDSSQRAVPVPSLFEEDVEFVGVELEGTEKAMEQALKEGIVGEAGPLKRNMVSKVPEKESTDEGGPGIKEFNDANYWRVDQEVAVLE 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01640 853 MobiDBLite consensus disorder prediction 696 778 - -
Gma12g01640 853 Pfam SIT4 phosphatase-associated protein 131 357 IPR007587 GO:0019903|GO:0043666
Gma12g01640 853 Pfam SIT4 phosphatase-associated protein 357 490 IPR007587 GO:0019903|GO:0043666
Gma12g01640 853 Gene3D - 85 425 IPR011989 -
Gma12g01640 853 PANTHER SIT4 YEAST -ASSOCIATING PROTEIN-RELATED 1 851 IPR007587 GO:0019903|GO:0043666
Gma12g01640 853 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 6 REGULATORY SUBUNIT 2-LIKE ISOFORM X1 1 851 - -
Gma12g01640 853 MobiDBLite consensus disorder prediction 639 668 - -
Gma12g01640 853 MobiDBLite consensus disorder prediction 613 668 - -
Gma12g01640 853 MobiDBLite consensus disorder prediction 710 737 - -
Gma12g01640 853 SUPERFAMILY ARM repeat 179 410 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01640 Gma-Chr12 36527627 36536057 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01640 K15501 - gmx:100777597 1619.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01640 12 36527627 36536057 Gma12g01640 12 36527627 36536057 ECH
Gma13g02898 13 43575042 43583931 Gma12g01640 12 36527627 36536057 GST
Gma12g01640 12 36527627 36536057 Gma12g00676 12 5921535 5930662 PCT
Gma12g01640 12 36527627 36536057 Gma11g01634 11 17694128 17703637 PCT
Gma12g00676 12 5921535 5930662 Gma12g01640 12 36527627 36536057 PCT
Gma11g01634 11 17694128 17703637 Gma12g01640 12 36527627 36536057 PCT