Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01499 ATGCCTTCTTCCCCCAAGTCCTACGCCATCTCCTACGCGCGCCAGCCCACGCGCAGATCCACCCTCTACCTCCTCCTCTCCGCCCTCTTCCTCTTCGGAATCGTTGCTTTCCTCGGCCAGATTCGTGGCAGCCGCTGCGTCAACGCGCACCCCCGATCGGTGCGCATCGTTTGGGAACACTCCGCCGGCAACGGTGCCGCCGGTAGTGGGGTCGGCGACGGAGACAGGCATAAGGTGATGGGGTTTGTGGGCATTCAAACCGGGTTCACGTCGGCGGGGAGGAGAGAGTCCTTGAGGAAGACGTGGTTCCCCTCTGATCGCCAAGGACTTCAACGGTTAGCTTTCTTCAAAGCTGCTTATGCTCTTTTTGATGCTGAATTTTATGTCAAAGCTGATGATGACATATATTTAAGGCCAGATCGTCTATCATTACTACTGGCAAAAGAGCGATCTCATCCTCAGACATACATAGGATGTATGAAAAAGGGACCTGTTTTCACTGATCCAAAACTCAAATGGTATGAACCATTGTCACATTTGCTTGGAAAGGAGTATTTTCTTCATGCTTACGGTCCTATATATGTTCTTTCTGCCGATGTTGTCCAAAGCTTGATTGCCCTTAGGAATGACAGTTTCCGGATGTTCAGCAATGAGGATGTTACCATTGGAGCTTGGATGCTTGCAATGAATGTCAACCATGAGAATAATCATGAACTTTGTTCTACAGATTGTACAGCCACATCTATTGCAGTGTGGGATATTCCGAAGTGTTCAGGCCTATGTAATCCAGAAAAGAAAATGTTGGAACTCCATCAAAAGGAAACCTGCTCTAAGAGCCCAACTCTGGAATCAGATGATGAATAG 864 0.4861 MPSSPKSYAISYARQPTRRSTLYLLLSALFLFGIVAFLGQIRGSRCVNAHPRSVRIVWEHSAGNGAAGSGVGDGDRHKVMGFVGIQTGFTSAGRRESLRKTWFPSDRQGLQRLAFFKAAYALFDAEFYVKADDDIYLRPDRLSLLLAKERSHPQTYIGCMKKGPVFTDPKLKWYEPLSHLLGKEYFLHAYGPIYVLSADVVQSLIALRNDSFRMFSNEDVTIGAWMLAMNVNHENNHELCSTDCTATSIAVWDIPKCSGLCNPEKKMLELHQKETCSKSPTLESDDE 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01499 287 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 112 278 IPR002659 GO:0006486|GO:0016020|GO:0016758
Gma12g01499 287 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 2 110 IPR002659 GO:0006486|GO:0016020|GO:0016758
Gma12g01499 287 Pfam Galactosyltransferase 112 236 IPR002659 GO:0006486|GO:0016020|GO:0016758
Gma12g01499 287 PANTHER HEXOSYLTRANSFERASE 2 110 - -
Gma12g01499 287 PANTHER HEXOSYLTRANSFERASE 112 278 - -
Gma12g01499 287 SUPERFAMILY Nucleotide-diphospho-sugar transferases 113 228 IPR029044 -
Gma12g01499 287 Gene3D - 99 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01499 Gma-Chr12 31472299 31479863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01499 4 287 Glycosyltransferase AT1G53290 60.000 6.10e-142 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01499 - - gmx:100804717 542.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01499 12 31472299 31479863 Gma12g01499 12 31472299 31479863 ECH
Gma13g02403 13 38789067 38793418 Gma12g01499 12 31472299 31479863 PCT
Gma12g01499 12 31472299 31479863 Gma13g02403 13 38789067 38793418 PCT