Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01406 ATGGTCACTCTCTTCGACTCCCTCGCCGTCGTGCGTCTCCCCACCGCCGCCTTCTCCCCGGCTGCCACCAGCCGGACCTCCGTTTTGCTCCCGCACTGCGCCGGCCTCAGGCTCAGACCCGCCGCCGCCACGCGCTTAGTTGCGTCCCCCGCTCGCAGAATCGCTTCACGCGCCGCGCGCGTCGTATGTGAGGCTCAGGATACCGCCGTCGAAGTGGCTCCTATTACTGATGCAAATTGGCAATCCCTTGTCCTTGAATCTGAATCTGCTGTTTTGGTTGAATTCTGGGCGCCATGGTGTGGTCCCTGCCGAATGATTCACCCTATAATAGATGAACTGGCAAAGCAATATGCTGGGAAGCTCAAGTGTTACAAACTCAACACGGATGAGAGCCCTTCAACCGCTACTCGGTATGGAATTCGAAGCATCCCTACTGTTATGATCTTCAAGAATGGTGAGAAGAAAGATACAGTTATTGGTGCTGTGCCCAAGTCAACATTGACTGCGAGCATAGAAAAATTCGTATGA 528 0.5455 MVTLFDSLAVVRLPTAAFSPAATSRTSVLLPHCAGLRLRPAAATRLVASPARRIASRAARVVCEAQDTAVEVAPITDANWQSLVLESESAVLVEFWAPWCGPCRMIHPIIDELAKQYAGKLKCYKLNTDESPSTATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEKFV 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01406 175 PRINTS Thioredoxin family signature 91 99 - -
Gma12g01406 175 PRINTS Thioredoxin family signature 99 108 - -
Gma12g01406 175 PRINTS Thioredoxin family signature 139 150 - -
Gma12g01406 175 ProSitePatterns Thioredoxin family active site. 92 110 IPR017937 -
Gma12g01406 175 Gene3D Glutaredoxin 72 175 - -
Gma12g01406 175 PANTHER GEO12009P1 3 175 - -
Gma12g01406 175 TIGRFAM thioredoxin: thioredoxin 76 174 IPR005746 GO:0015035
Gma12g01406 175 PANTHER THIOREDOXIN M-TYPE PROTEIN 3 175 - -
Gma12g01406 175 Pfam Thioredoxin 72 172 IPR013766 -
Gma12g01406 175 CDD TRX_family 78 172 - -
Gma12g01406 175 ProSiteProfiles Thioredoxin domain profile. 52 175 IPR013766 -
Gma12g01406 175 SUPERFAMILY Thioredoxin-like 69 174 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01406 Gma-Chr12 22414049 22417186 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01406 K03671 - gmx:100818054 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01406 12 22414049 22417186 Gma12g01406 12 22414049 22417186 ECH
Gma12g01406 12 22414049 22417186 Gma06g02245 06 41896073 41899302 GST
Gma13g02460 13 39398056 39400455 Gma12g01406 12 22414049 22417186 PCT
Gma12g01406 12 22414049 22417186 Gma13g02460 13 39398056 39400455 PCT