Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01395 ATGAGGGGTCCTTTGGGTGCAGTAATAGGAAGATACCCATCAAGTGATGGAGTTACCCAAATGGGTGGAATTATAAGGCACAACAGGAAATGCAGGGACATCACTGTTCTAGTGATCTTCATAGCTTTTTGGATAGCAATGATTGTCAACTCCAGCTTTGCTTTCAACCAAGGAAACCCACTGAGGCTTACTTATGGACTTGACTACAAAGGGAATGTGTGTGGTGACAAGCATGCACACCCTGGCCTTAGTGAATTGGAGCTCAGATATTGGCAAAATCCTAACCAGGTTTATCAGAGTGGATTGAAGGATAGCCAATTCAAACTGGCTGATGCCCGCAGTATATGCTTGTCGGAGTGCCCTATGCCTTCGGAAGATTCCCTTAATTGGGTGTGTGATTATCCTGAAGGAGATATTCGTCTTTCGATGAAAGATTGGATTAATAGGAACTATGATTATTTTGAGTTTCTTACACCGGAAATGAGAAACTCCTCTCTTCAACTACAGGGTCCATGTTATCCTGTAATATTTCCCAGTGTAAATGTTTACTGGAGTTGCCAATTCATTGCTCGGGCATCAAATACATCTTTGAAGCATTGGCAGCAGATGGGTGGAGTTAACATCAACGAAGACATTGTTATTGACAAGTCCATTCACAAGTCTATTAATTCTCGGTCATCTGTCTTAAAGAGATACATGGCAGACATAGGAAAGGCATGGCCTGTGTTGATTGTTTGTGGAGGGATTTTGCCTCTTTTTCTGTCTGTGATTTGGCTGATGATGATTCGACATTTTGTTGCTGCAATGCCTTGGATAACAGTTGTGCTCTTTAATGTTCTAATAATATCTGTCACAATGTTCTACTACCTTAAAGCTGGATGGATTGGAAATGATGCCATTTCTCCCATCATTGGTGAGCATGACCCTTACATTAGTGTATATGGGAGGGAGCTGACTCATATACGAGTTGTCACTATACTTATGACCTCTATCATGGTTGTCGCCATTCTTACATCAATTGCTATTGTTCGCCGCATCCTTATGGCAACATCTGTCCTGAAGGTTGCTGCAAAAGTGATAGGAGAAGTTCAAGCCCTCATTATTTTTCCTCTCATACCATATGCTATCCTTGCAGTGTTTTACATGTTCTGGATTTCAGCTGCTCTCCATTTGTTCAGCTCTGGCGAGGTTGTTCAGAATAATTGCAACTCTAACTGTTGCACATATGATCTTATTGCAAAACGGGTAAAATGCGATCGTTGTTGTGGTTATAGCATTCATTACACACCACATATTGGAGTTGCCATCCTTTTCCACCTATTTGGGTGTTATTGGGCTACACAATTTTTCATAGCTTGCTCCTCAACAGTGATTGCTGGGTCTGTCGCGTCTTATTACTGGGCCCGTGGTGAAACATCCCCAGAAATTCCATTTCTTTCTGTCTTTTCCTCCATGAAGAGGCTTATGCGTTACAGTCTTGGGTCTGTGGCTCTTGGCTCTCTGATTGTATCATTTGTAGAATCAATCCGCTTTCTGCTTGAAGTTATTCGTCGTAAGCTAAAAGTCTCAAGTCATAGGCATGACAGCTGCTTAGGCAAGGCTGCATACCAATCTTCTCAATGTTTTCTCAGGTGTATTGAATGGACCATCAAATCAGTAAACCGAAATGCTTACATCCTGATTGCTATAACAGGCAAAAGTTTCTTTAGCGCTTCTTCTATTGCAACAGAACTGATTATGAATAATATTCTAAAGATTGGGCGTCTTAATGTGATTGGAGATGTCATTTTGTTCCTTGGAAAACTGTGTGTCAGCCTCTCGTGTGCTTTGTTTGCGTTCCTCATGTTGGACACACACAAGTACAACTCTGCTCATAACAAGACCTCATCTCCCCTCTTACCTGTTGTGGTTTGCTGGGCTCTTGGATACATTGTTTCAACCCTTTTCTTTGCAGTTGTGGAGATGTCAATTGATACCATAGTTCTCTCATTCTGCCAGGATTCTGAAGAGCACCAAGGGACAGCACACAAAAGCCTATTGGTGTTACCTCAATTTAACATAAACGATGCGTTGTTCTCCAAAGAGGACGAAAGAGGAAAAAAAAACGCAGTGGGAAGTGGGAACAAATACTCAACGCTGTTTCTGTATCTGTTGCAAATTGAAGGCAAAGGTTCCAAGAGCAAAGTTTCTGGCCTATATACCATGGGAAGCAGAGGAGTAATTGCGGACAAGTGGTCCATGAGAATTCTTTGGGCATGTGCTATTGGAAGTGCCGTCAGCCTGTATATGGTTGCTGTAGAAAGGCAAGCACAGAATAGGCAGAGGATGCTGGCTGAAGAATTGAAAGCAATGGAGTCAGGGGAAAGCAACGGCAAAGATGGATGA 2385 0.4226 MRGPLGAVIGRYPSSDGVTQMGGIIRHNRKCRDITVLVIFIAFWIAMIVNSSFAFNQGNPLRLTYGLDYKGNVCGDKHAHPGLSELELRYWQNPNQVYQSGLKDSQFKLADARSICLSECPMPSEDSLNWVCDYPEGDIRLSMKDWINRNYDYFEFLTPEMRNSSLQLQGPCYPVIFPSVNVYWSCQFIARASNTSLKHWQQMGGVNINEDIVIDKSIHKSINSRSSVLKRYMADIGKAWPVLIVCGGILPLFLSVIWLMMIRHFVAAMPWITVVLFNVLIISVTMFYYLKAGWIGNDAISPIIGEHDPYISVYGRELTHIRVVTILMTSIMVVAILTSIAIVRRILMATSVLKVAAKVIGEVQALIIFPLIPYAILAVFYMFWISAALHLFSSGEVVQNNCNSNCCTYDLIAKRVKCDRCCGYSIHYTPHIGVAILFHLFGCYWATQFFIACSSTVIAGSVASYYWARGETSPEIPFLSVFSSMKRLMRYSLGSVALGSLIVSFVESIRFLLEVIRRKLKVSSHRHDSCLGKAAYQSSQCFLRCIEWTIKSVNRNAYILIAITGKSFFSASSIATELIMNNILKIGRLNVIGDVILFLGKLCVSLSCALFAFLMLDTHKYNSAHNKTSSPLLPVVVCWALGYIVSTLFFAVVEMSIDTIVLSFCQDSEEHQGTAHKSLLVLPQFNINDALFSKEDERGKKNAVGSGNKYSTLFLYLLQIEGKGSKSKVSGLYTMGSRGVIADKWSMRILWACAIGSAVSLYMVAVERQAQNRQRMLAEELKAMESGESNGKDG 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01395 794 Pfam Plasma-membrane choline transporter 326 669 IPR007603 GO:0022857|GO:0055085
Gma12g01395 794 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 3 677 IPR007603 GO:0022857|GO:0055085
Gma12g01395 794 PANTHER PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN 3 677 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01395 Gma-Chr12 22141724 22152525 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01395 K15377 - gmx:100815939 1366.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01395 12 22141724 22152525 Gma12g01395 12 22141724 22152525 ECH