Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01370 ATGGCGTTCCCTCTCTCTTCCTCCTCCTTCCACCTCACCGTCGCTCGAAACCGAATCACGTGCTTCTCGAAGAAGCACCAACGCCACGTCATCGCAAAGGTCACGGTTTGCAATTGCAATACCACCACCACGCGTGCCACGCCAGCGAGGAGTGTTGTGGAAAAGATAGTAAAGCGGTTGAGGAGTGTGGTTGTGGTTCCGATCGTGCTTGCGTCGTTTCCTATAAGCGCTTTCGTGGCGCCGTTGGTTGATTACGTGACGTCTCCTGGTGTCGCCGAAGCGGTTCTGTATTCGCCGGACACGAAGGTTCCGAGAACGGGGGAAGTTGCTCTCAGGAGAGCCATCCCTGCCAATGCCAACATGAAGGCTATACAGGACACTCTTGAAGATATATTTTACCTGTTGAGGATTCCGCAGAGAAAACCTTATGGAACAATGGAGGGGAATGTGAAGAAAGCTTTGAAGATAGCAGTAGATGAAAAGGATTCTATATTGGCTAGTATACCTGCAGAACTGAAGGAAAAGGGCTCTTTGGTACATGCATCTCTAATAGAGGGAAAGGGGGGCTTGCAAACTCTCCTTCAGTCTATAAAGGAACAGGATGCAGATAAAGTATCTGTGAGCCTTACATCTACACTGGATACTGTAGCAGAGCTAGAGTTGTTACAGGCACCGGGATTATCATTTTTGTTGCCAGAGCAGTATGCACAACAATATCCACGGCTTTCAGGGAGAGGAACTGTTGAGTTCACCATTGAGAAAGGAGATGGTTCAACATTTTCTCCTGTTGGTGGAGAGCAGAAAAATACTGCCACCGTTCAGGTTGTTATAGATGGATACTCAGCTCCATTAACTGCAGGGAATTTTGCAAAACTGGTGATGGATGGAGCCTATAATGGCGCAAAGCTCAATTGTATCAACCAAGCTGTTATTTCAGATAATGGAGTTGATAAGAACACTGGTTATAGTGTTCCCTTGGAAATAATGCCCTCTGGACAATTTGAGCCCCTTTACAAAACAACATTAAGTGTGCAGGATGGAGAACTGCCGGTTCTTCCACTATCTGTTTATGGGGCACTTGCTATGGCTCATAGCGAAGCCTCGGAGGAGTATTCATCCCCTTATCAGTTTTTCTTCTATCTCTATGATAAACGAAGTGCTGGTTTGGGAGGGATATCATTTGACGAAGGACAATTTTCAGTTTTTGGATACACAACCACCGGGAGAGACATTCTACCCCAGATAAAAACTGGTGATGTTATTCGTTCTGCAAAGCTTATTGAAGGCCAAGATCGTCTTGTATTGCCCAAGGAGAGTTGA 1320 0.4621 MAFPLSSSSFHLTVARNRITCFSKKHQRHVIAKVTVCNCNTTTTRATPARSVVEKIVKRLRSVVVVPIVLASFPISAFVAPLVDYVTSPGVAEAVLYSPDTKVPRTGEVALRRAIPANANMKAIQDTLEDIFYLLRIPQRKPYGTMEGNVKKALKIAVDEKDSILASIPAELKEKGSLVHASLIEGKGGLQTLLQSIKEQDADKVSVSLTSTLDTVAELELLQAPGLSFLLPEQYAQQYPRLSGRGTVEFTIEKGDGSTFSPVGGEQKNTATVQVVIDGYSAPLTAGNFAKLVMDGAYNGAKLNCINQAVISDNGVDKNTGYSVPLEIMPSGQFEPLYKTTLSVQDGELPVLPLSVYGALAMAHSEASEEYSSPYQFFFYLYDKRSAGLGGISFDEGQFSVFGYTTTGRDILPQIKTGDVIRSAKLIEGQDRLVLPKES 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01370 439 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP37, CHLOROPLASTIC 14 438 IPR044259 -
Gma12g01370 439 Gene3D - 117 222 IPR023222 -
Gma12g01370 439 Gene3D - 265 431 IPR029000 -
Gma12g01370 439 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 260 439 IPR002130 GO:0000413|GO:0003755
Gma12g01370 439 SUPERFAMILY Cyclophilin-like 272 423 IPR029000 -
Gma12g01370 439 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 272 422 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01370 Gma-Chr12 21412170 21419295 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01370 - - gmx:100809532 831.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01370 12 21412170 21419295 Gma12g01370 12 21412170 21419295 ECH