Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01337 ATGGAGCTAGATTATGGTTTTGACTTTGAGGACTGCTTCCCTTCGATGATTGCGCGGTTGGGCGCGGAAGGGTTCATCGGGGAGCTTTGCAACGGGTTCCGGTTGCTCATGGATGTGAACATGGGGCTCATAACATTTGAGAGCTTGAAGATGAGCACTAACTTGCTTGGTTTGGAGGTGAGGGATGATGAGTTGTTGTGCATGCTTATGGAAGGTGATTTGGATGGAGATGGGGCTCTTAACCAGATGGAGTTTTGCATTCTCATGTTTAGGTTGAGTCCGTGCTTGATGGATATGCAAGGTATGGAACCGGTCCATCATGTTAATGTCATATAG 336 0.4732 MELDYGFDFEDCFPSMIARLGAEGFIGELCNGFRLLMDVNMGLITFESLKMSTNLLGLEVRDDELLCMLMEGDLDGDGALNQMEFCILMFRLSPCLMDMQGMEPVHHVNVI 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01337 111 ProSitePatterns EF-hand calcium-binding domain. 73 85 IPR018247 -
Gma12g01337 111 Pfam EF-hand domain pair 42 91 IPR002048 GO:0005509
Gma12g01337 111 SUPERFAMILY EF-hand 24 96 IPR011992 -
Gma12g01337 111 PANTHER CALCIUM-BINDING PROTEIN KIC 4 100 IPR044205 GO:0005509
Gma12g01337 111 Gene3D - 7 108 - -
Gma12g01337 111 PANTHER CALCIUM-BINDING PROTEIN PBP1-LIKE 4 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01337 Gma-Chr12 20358743 20359483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01337 8 98 EF-hand Containing Proteins AT4G27280 60.215 1.67e-31 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01337 K24345 - gmx:100795879 231.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01337 12 20358743 20359483 Gma12g01337 12 20358743 20359483 ECH