Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01307 ATGGAACCATCCAAAAACTCGCAGAAGCCCTCACATTTCCATGACTACCTCCCCGTGATGGCGAACAAGCTCGGCGGGGACGGCCTCATCGATGAGCTCTGCAACGGCTTCAACCTGCTCAAGGACTCCGACAGAGGGGTGATAACCTTTGAGAGCCTCAAGAGGAACGCTGCTCTGCTGGGCCTGCAAGGACTCGGCGATGAGGACCTTCGGTCGATGCTCGGGCAGGGTGATTTCGACGGCGATGGCGCGCTGAGCCAGCTGGAGTTCTGTGTTTTGATGTTCAGGCTCAGCCCTGAGCTCATGGAGGGGTCCAAGTTGTGGCTGGAGGAGGTGCTTCAGCAGGAACTTGAACATTGA 360 0.575 MEPSKNSQKPSHFHDYLPVMANKLGGDGLIDELCNGFNLLKDSDRGVITFESLKRNAALLGLQGLGDEDLRSMLGQGDFDGDGALSQLEFCVLMFRLSPELMEGSKLWLEEVLQQELEH 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01307 119 Pfam EF-hand domain pair 45 96 IPR002048 GO:0005509
Gma12g01307 119 Gene3D - 11 119 - -
Gma12g01307 119 ProSitePatterns EF-hand calcium-binding domain. 78 90 IPR018247 -
Gma12g01307 119 PANTHER CALCIUM-BINDING PROTEIN KIC 7 118 IPR044205 GO:0005509
Gma12g01307 119 PANTHER CALCIUM-BINDING PROTEIN KRP1 7 118 - -
Gma12g01307 119 ProSiteProfiles EF-hand calcium-binding domain profile. 65 100 IPR002048 GO:0005509
Gma12g01307 119 SUPERFAMILY EF-hand 30 97 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01307 Gma-Chr12 18922346 18923455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01307 3 117 EF-hand Containing Proteins AT4G27280 62.069 8.80e-48 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01307 K24345 - gmx:100527035 210.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01307 12 18922346 18923455 Gma12g01307 12 18922346 18923455 ECH