Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01288 ATGGATCATGCGGTTTGCATATGGAATGTATGGGGCAGAAATCAGAAGAAAGCATGTGTGCTAAACTTCCACAATGCAGCAGTCAAAGATGTGAAATGGTCTCAGCAAGGGCACTTCCTACTTTCTTGTGGGTATGATTGCACGTCAAGGTTAATTGATGTTGAAAAGGGATTGGAGACTCGGGTTTTCAGAGAAGATCAAATTGTTGGAGTTATAAAGTTCCATCCAGACAATTCAAATCCTACGAAGCACGGACACCCCATCCCCTTGCCGTGTCCGGGTGTCCGACACGTGTCCGTGTCCGTGTCCAACACGACACCGACACTGACAAGTCCAATTCTGGATGTTGAGTTCACAATGAATGGGAAGCAATTCATCTCTTCTAGTGATGTATCTCAAAGTAACGCCAACAAGAACGCTATTATTGTTTGGGATGTGTCAAGAGAGATACCATTGTCTAATCAGGTTTATGTGGAAGCTTATACGTGTCCCTGTGTGAGGTGCCACCCATTTGATTCAATTTTTGTTGCCCAATCAAATGGGAATTATGATGCAATCTTTACTACCACCCCACCTTACAGACTCAACAAATATAAGCGATATGAGGGACATGTGGTCTCTGGGTTTCCAATCAAATGCAATTTCAGCTTGGATGGGAAAAAACTTGCTTCTGGCTCTTCAGATGGTTCTATCTACCTTTATGATTATCAGTCATCCAAAGTCGTGAAGAAAATCAAGGCCCATGACCAGGCATGCATAGATGTTGCCTTCCACCCTGTTATACCTAATGTTATTGCTTCATGCTCATGGGATGGAAGTATTTTGGTATTTGAGTAG 837 0.4301 MDHAVCIWNVWGRNQKKACVLNFHNAAVKDVKWSQQGHFLLSCGYDCTSRLIDVEKGLETRVFREDQIVGVIKFHPDNSNPTKHGHPIPLPCPGVRHVSVSVSNTTPTLTSPILDVEFTMNGKQFISSSDVSQSNANKNAIIVWDVSREIPLSNQVYVEAYTCPCVRCHPFDSIFVAQSNGNYDAIFTTTPPYRLNKYKRYEGHVVSGFPIKCNFSLDGKKLASGSSDGSIYLYDYQSSKVVKKIKAHDQACIDVAFHPVIPNVIASCSWDGSILVFE 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01288 278 ProSiteProfiles Trp-Asp (WD) repeats profile. 215 244 IPR001680 GO:0005515
Gma12g01288 278 Pfam WD domain, G-beta repeat 20 52 IPR001680 GO:0005515
Gma12g01288 278 Pfam WD domain, G-beta repeat 199 235 IPR001680 GO:0005515
Gma12g01288 278 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 1 278 - -
Gma12g01288 278 SUPERFAMILY WD40 repeat-like 2 277 IPR036322 GO:0005515
Gma12g01288 278 SMART WD40_4 194 235 IPR001680 GO:0005515
Gma12g01288 278 SMART WD40_4 14 53 IPR001680 GO:0005515
Gma12g01288 278 SMART WD40_4 99 145 IPR001680 GO:0005515
Gma12g01288 278 SMART WD40_4 238 278 IPR001680 GO:0005515
Gma12g01288 278 Gene3D - 1 278 IPR015943 GO:0005515
Gma12g01288 278 ProSiteProfiles Trp-Asp (WD) repeats profile. 21 62 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01288 Gma-Chr12 18010612 18016939 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01288 K24742 - gmx:100790592 483.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01288 12 18010612 18016939 Gma12g01288 12 18010612 18016939 ECH