Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01286 ATGCCTGAGGCACCGAGAGACTACAACCTTTTTGAGCAAAACAAGAAAACTCTCGAGTTCATTGAGGATGTCACTGCCAACGCAGACCAAGTTCAGAAGAGGGTCCTCTCCGAAATCCTCTCCAACAATGCAAACGTTGAGTACCTCAAGAGACACGACCTCCACGGCCAAACCGACCGCGAAACCTTCAAGAAACTCTTGCCTGTCATAACCTACGAGGACATCCAACCCGATATCAACCGCATCGCCAATGGCGACACTTCTCCAATCCTTTGCTCCAAACCCATTTCAGAATTCCTCACTAGTTCTGGGACATCAGGAGGTGAGAGGAAGCTGATGCCAACAATTGAAGAAGAGCTAGGGAGAAGGAGTTTGCTCTACAGCCTCTTGATGCCAGTGATGTCCCAGTTCGTCCCCGGTTTAGAAAAGGGCAAAGGAATGTACCTAATGTTCATAAAATCCGAGGCCAAAACGCCCGGTGGAATCGTGGCGCGTCCAGTTCTCACCAGCTACTACAAAAGCTCCTACTTCAAAGACAGACCTTATGATCCCTACACCAACTACACCAGCCCAAACGAGACTGTCCTCTGCCCGGACTCTTACCAGAGCATGTACTCCCAGCTCCTCTGTGGCCTCTGCCAACACAAGGAGGTCCTCCGCGTCGGCGCCGTCTTCGCCTCCGGCTTCATCAGGGCCATCCGCTTCCTTGAGAAGCACTGGCCCCTCCTTTGCCACGACATTCGAACCGGCACCATTAACAACACAATCACGGACCTCTCGGTCCGCGACGCTGTGATGAAGATCCTCAAGCCCGACCCGAGGCTTGGGGATCTCATCCAGAGCGAGTGTGGCAAGAGCTCCTGGCAGGGCATCATCACCAGGCTGTGGCCCAACACTAAGTATGTGGATGTGATTGTGACTGGGACAATGTCACAGTACATCCCCACGTTGGACTACTATAGCAATGGGCTACCACTTGTGTGCACCATGTATGCGTCTAGTGAGTGCTACTTTGGTGTCAACCTTAACCCTCTTTGCAAGCCCAGCGAGGTCTCTTACACCCTCATTCCCACCATGTGCTACTACGAGTTCTTGCCTGTTAATAGAAGCAACGGGGTGTCTCATGACTCTCTCCACACCCCCAGATCCCTCAATGAGAAGGAACAGCAGGAGCTGGTTGAGCTTGTTGATGTCAAACTTGGCCAAGAATATGAACTTGTTGTCACAACTTATGCTGGATTGTATCGTTACAGAGTTGGTGATGTGCTGAGGGTGGCTGGATTCAAGAACAAGGCACCCCAATTCAACTTTGTGTGCAGAAAGAACGTGGTGTTGAGCATAGACTCGGACAAGACCGACGAGGTGGAGCTTCAGAACGCAATGAAGAATGCTGTGACACACTTGGTGCCCTTTGACGCATCGGTGTCTGAGTACACAAGTTATGCAGACACCACAACAATTCCTGGCCACTATGTCTTGTACTGGGAGCTCAGCCTCAAAGGCTCAACCCCAATTCCACCCTGTGTGTTTGAGGATTGTTGCTTAGCCATAGAGGAATCACTCAACAGCGTGTATCGTCAAGGCCGCGTCTCCGACAAATCGATCGGGCCCCTTGAGATCAAGATTGTGGAACAGGGGACTTTTGACAAGCTCATGGACTATGCCATAAGCCTAGGGGCTTCAATAAATCAGTACAAGACTCCAAGGTGTGTTAAGTTTGCACCTGTGGTGGAGCTCTTGAACTCAAGGGTGGTGGAGAAGTATTTTAGTCCCAAATGTCCAAAATGGGTTCCGGGCCACAAGCAGTGGATCAACCAGAACTGA 1824 0.5099 MPEAPRDYNLFEQNKKTLEFIEDVTANADQVQKRVLSEILSNNANVEYLKRHDLHGQTDRETFKKLLPVITYEDIQPDINRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEEELGRRSLLYSLLMPVMSQFVPGLEKGKGMYLMFIKSEAKTPGGIVARPVLTSYYKSSYFKDRPYDPYTNYTSPNETVLCPDSYQSMYSQLLCGLCQHKEVLRVGAVFASGFIRAIRFLEKHWPLLCHDIRTGTINNTITDLSVRDAVMKILKPDPRLGDLIQSECGKSSWQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGVNLNPLCKPSEVSYTLIPTMCYYEFLPVNRSNGVSHDSLHTPRSLNEKEQQELVELVDVKLGQEYELVVTTYAGLYRYRVGDVLRVAGFKNKAPQFNFVCRKNVVLSIDSDKTDEVELQNAMKNAVTHLVPFDASVSEYTSYADTTTIPGHYVLYWELSLKGSTPIPPCVFEDCCLAIEESLNSVYRQGRVSDKSIGPLEIKIVEQGTFDKLMDYAISLGASINQYKTPRCVKFAPVVELLNSRVVEKYFSPKCPKWVPGHKQWINQN 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01286 607 Pfam GH3 auxin-responsive promoter 21 572 IPR004993 -
Gma12g01286 607 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 7 604 IPR004993 -
Gma12g01286 607 PANTHER BNAC03G14570D PROTEIN 7 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01286 Gma-Chr12 17973871 17976570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01286 9 590 EF-hand Containing Proteins AT1G23160 49.408 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01286 K14487 - gmx:100791987 1239.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01286 12 17973871 17976570 Gma12g01286 12 17973871 17976570 ECH