Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01273 ATGGCAGCAAGAGCAACAGCAATCTTTAACACTCCCTCCTCCTCCTCCTTCTTCACATTCACACTCTTTCTCTCTCTCTCTCTCCTCCTCCAACTTTCTCTCTCCTCCCCCTCTCCCTCCATCCACGACCTTCTCCGCTCCAAAGGCTTGCCCCCCGGCCTCCTCCCAGAGGAGGTGAAATCCTACAGCTTCTCCGAAACCGGCCACTTGGAAGTCTTCCTTGACGCGCCGTGCCTGACCAAATACGAGAACAGAGTCCTCTTCGAGCAAGTCGTCACCGCCAACCTCACCTATGGAAGCCTCATAGGAGTGGAGGGTCTCCAGCAAGAGGAGCTCTTCGTGTGGCTACCCGTCAAGGACATAATCGTAAATGACCCCTCCTCGGGGTTGATACTGTTTGACATTGGCCTCGCCCACAAACAGCTCTCGCTCTCCCTCTTTGAAGATCCGCCTCACTGCAAACATGAAGGTGGGTTGAGGAATCATGTGAGGAAGGAAAAAGGTTTCGAGGCCCTGAGGTAG 522 0.5441 MAARATAIFNTPSSSSFFTFTLFLSLSLLLQLSLSSPSPSIHDLLRSKGLPPGLLPEEVKSYSFSETGHLEVFLDAPCLTKYENRVLFEQVVTANLTYGSLIGVEGLQQEELFVWLPVKDIIVNDPSSGLILFDIGLAHKQLSLSLFEDPPHCKHEGGLRNHVRKEKGFEALR 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01273 173 Pfam Protein of unknown function, DUF538 42 148 IPR007493 -
Gma12g01273 173 Gene3D - 27 155 IPR036758 -
Gma12g01273 173 PANTHER - 20 172 - -
Gma12g01273 173 SUPERFAMILY At5g01610-like 16 155 IPR036758 -
Gma12g01273 173 PANTHER T31J12.3 PROTEIN-RELATED 20 172 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01273 Gma-Chr12 17520929 17523105 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01273 - - gmx:100790931 297.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01273 12 17520929 17523105 Gma12g01273 12 17520929 17523105 ECH
Gma12g01273 12 17520929 17523105 Gma06g02412 06 46220796 46222625 GST