Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01236 ATGGGGATATCGATTAAGAAGCCAAGGCCAACGCAACAAGACGTTGTGGTTGGTGACATGGAAGTGATTTGTCGGAGGAGAACGTTGTTGGTGATGTTGGTTGGTTCAAAGAAGAAAAGGTTGTTGGTCATTGCACCTTCTGTCTCTCTGTGGAAGGGTGGTGACCAATTGAGATTTTTCCAAGCGGATTTGCATGAAGAAGGAAGCTTCGATGAGGCTGTTAAAGGATGTGTCGGCGTGTTCCATATTGCTGCTTCAATGGAGCTCAATGTTAGTGACAAAGAAAACAATGAGGCTTTTGTTCAAGCGAATATAATTAACCCTGCAATCAAAGGAACCATAAACCTTCTCAAGTCTTGTTTGAAATCCAATTCTGTGAAAAGGGTTGTCTTCACGTCTTCCATTAGTACCGTTACTGCCAAAGACATAAATGGAAAGTCGAAACATATTGTTGATGAATCTTGCCAAATCCACCCTGACACATGGCTTTTTCTGTGGTGGCAGGTCTATGCACTTTCAAAGCTTCTCACAGAAGAAGCAGCATTTCAATTTGCAAAAGAGAACGGCATTGATCTTGTGTCAGTTATAACAAGCACTGTTGCAGGCCCTTTCTTCACGGCTAATGTACTAACAAGTGTTAAAGTTCTACTGTCGCCATTAACAGGTGAAACAGAGTACTTCAAGATATTATCTGCTGTAAATGCAAGAATGGGGTCAATCGCTTTAGTTCACATTGAAGATATATGCAGTGCTCACATATTCCTAACAGAGCATGCTAAAGCAGAAGGTCGATACAAATGCAGCAGCCAAAGTTGTACATTGTCTAACTTGGCTACCCTTCTTTCCAAAGTGTATTGA 858 0.4149 MGISIKKPRPTQQDVVVGDMEVICRRRTLLVMLVGSKKKRLLVIAPSVSLWKGGDQLRFFQADLHEEGSFDEAVKGCVGVFHIAASMELNVSDKENNEAFVQANIINPAIKGTINLLKSCLKSNSVKRVVFTSSISTVTAKDINGKSKHIVDESCQIHPDTWLFLWWQVYALSKLLTEEAAFQFAKENGIDLVSVITSTVAGPFFTANVLTSVKVLLSPLTGETEYFKILSAVNARMGSIALVHIEDICSAHIFLTEHAKAEGRYKCSSQSCTLSNLATLLSKVY 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01236 285 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 48 285 - -
Gma12g01236 285 Pfam NAD dependent epimerase/dehydratase family 54 261 IPR001509 -
Gma12g01236 285 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 48 285 - -
Gma12g01236 285 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 40 284 IPR036291 -
Gma12g01236 285 Gene3D - 31 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01236 Gma-Chr12 16491229 16494482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01236 49 267 Miscellaneous Gene Families AT4G27250 59.641 1.30e-85 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01236 - - gmx:100787267 408.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01236 12 16491229 16494482 Gma12g01236 12 16491229 16494482 ECH