Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01214 ATGATTTCTGCTACTAAACTCAAATCTGTCGATTTTTACAGGAAAATCCCGAGAGATTTGACTGAGGCGTCGTTATCAGGGGCGGGATTATCCATAGTGGCAGCTCTTGTTATGATGTTTTTATTTGGAATGGAACTAAGTAGTTATATGTCTGTTAGCACCTCCACATCTGTGATTGTTGACAAGAGTTCTGATGGTGACTATTTACGTATCGATTTCAATATCAGTTTTCCTGCACTCTCATGTGAGTTTGCATCAGTTGATGTGAGTGATGTGCTGGGAACAAACAGGCTCAATATAACAAAAACAGTTCGTAAGTTTTCTATTGATTCAAATTTAAGACCCACTGGTGCTGAGTTTCATTCGGGTACAGTTGCAAATGCTGTAAAGCATGATGATGAAGTAGATGAAGAATCTGTTGAAGGTTCTTTTTCACTCACAACACATAATTTTGATAAATATGTTCATCAGTTTCCAGTTACGATTGTAAATTTTTATGCACCTTGGTGTTCCTGGTGTCAACGTTTGAAACCATCATGGGAGAAGACGGCTAAAATTATGAAAGAGAGATATGACCCAGAAATGGATGGACGTATTATTTTGGCAAAGGTAGATTGCACTCAAGAAGGAGATTTATGCAGGAGGAATCACATACAAGGGTATCCATCTATTCGAATCTTTCGTAAAGGTAGTGATCTCAGAAGTGAACATGGGCATCATGAACACGAGTCCTATTATGGAGATCGAGATACAGAAAGCCTAGTCAAGTTTATGGAGGATTTAGTCACATCTCTCCCAACAGAATCTCAAAAGCTAGCTCTGGAGGATAAATCTAATGCTGCAGACAATGCAAAAAGGCCAGCACCATCAGCAGGTGGATGTAGAGTAGAGGGATATGTGCGTGTGAAAAAGGTTCCAGGAAATTTGATCATCTCAGCTAGATCAGACGCCCATTCTTTTGATGCTTCTCAAATGAACATGTCACATGTCATAAACAACTTGTCTTTTGGAAAGAAAGTGACTCCTAGGGCCATGAGTGATGTGAAGCTCTTGATACCATACATAGGTAGCAGCCATGACAGGCTCAACGGCCGGTCATTCATCAATACTCGTGATTTAGGTGCCAATGTTACTATAGAGCATTATATTCAGATAGTTAAAACTGAGGTAGTGACTAGGAAAGGTTATAAATTAATTGAGGAGTACGAGTACACAGCGCACAGCAGTGTGGCACACAGTCTGGACATTCCTGTTGCGAAGTTTCATCTTGAGCTCTCCCCCATGCAGGTCTTAATAACAGAAAACCAGAGGTCTTTTTCACATTTTATTACAAATGTCTGTGCCATTATTGGGGGTGTTTTCACGGTAGCTGGAATTTTGGACTCGATTCTGCACAACACTATAAGAATGGTGAAAAAAATTGAGCTTGGCAAAAATTTTTGA 1443 0.3985 MISATKLKSVDFYRKIPRDLTEASLSGAGLSIVAALVMMFLFGMELSSYMSVSTSTSVIVDKSSDGDYLRIDFNISFPALSCEFASVDVSDVLGTNRLNITKTVRKFSIDSNLRPTGAEFHSGTVANAVKHDDEVDEESVEGSFSLTTHNFDKYVHQFPVTIVNFYAPWCSWCQRLKPSWEKTAKIMKERYDPEMDGRIILAKVDCTQEGDLCRRNHIQGYPSIRIFRKGSDLRSEHGHHEHESYYGDRDTESLVKFMEDLVTSLPTESQKLALEDKSNAADNAKRPAPSAGGCRVEGYVRVKKVPGNLIISARSDAHSFDASQMNMSHVINNLSFGKKVTPRAMSDVKLLIPYIGSSHDRLNGRSFINTRDLGANVTIEHYIQIVKTEVVTRKGYKLIEEYEYTAHSSVAHSLDIPVAKFHLELSPMQVLITENQRSFSHFITNVCAIIGGVFTVAGILDSILHNTIRMVKKIELGKNF 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01214 480 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 1 480 IPR045888 -
Gma12g01214 480 CDD PDI_a_family 146 258 - -
Gma12g01214 480 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 7 97 IPR039542 -
Gma12g01214 480 Gene3D Glutaredoxin 126 274 - -
Gma12g01214 480 Pfam Thioredoxin 145 258 IPR013766 -
Gma12g01214 480 ProSiteProfiles Thioredoxin domain profile. 120 263 IPR013766 -
Gma12g01214 480 PANTHER PROTEIN DISULFIDE-ISOMERASE 5-3 1 480 - -
Gma12g01214 480 SUPERFAMILY Thioredoxin-like 145 261 IPR036249 -
Gma12g01214 480 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 354 413 - -
Gma12g01214 480 Pfam Endoplasmic reticulum vesicle transporter 289 461 IPR012936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01214 Gma-Chr12 15826029 15836141 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01214 - - gmx:100787595 927.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01214 12 15826029 15836141 Gma12g01214 12 15826029 15836141 ECH