Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01213 ATGGCGACTCGCGCGTTGCTCGGAGCAATCAAGAAACGCGCCGTTTCGTTCCCCGCATTCCCCGGCCACTCCAGTTAtCGACACGGTAGCACGCTTGTTGTGGCGGAACACGAAGGTGGTTTTATCAAACCCCCTTCTCTGTCTGCACTTGCTGCTGCCACGTGTCTTCCCGATCCCGACTCTTCCGTTTCTGTGCTCTTGGCCGGTTCGGGTCCTTCTCTGCATCAAGCTGCTTCACATGCTGCTTCGTGCCaCCCTTCAATCTCCAAGGTGCTCGTGGCAGATTCGGATAAATTCAAGAACCCTCTGGCAGAGCCCTGGGCTAAATTAGTCCATTTGCTTCAGCAGAGTAGCGGTTACTCTCATATAATTGCTGCTGCAAATTCTTTTGGGAAAAATGTCATGCCGCGTGCTGCTGCCCTTTTAGATGTCTCTCCCATTACTGATGTTACTGGAATTTCTGATTCCAATACTTTCGCCAATATATGCTGGAAATGCACTTTGAACCACCGATATACTGGTGCCAATCCTTGTATATTAACTATTAGATCCACATCTTTTCCTGTTCCTCAGAAGTCAGTTGACTCAAAATCCAACGAGGCTTCAATATCTCAGGTTGACCTTTCAACCTTTGATGAAGATCTGGACAAGTCTAGATATATTTCTCAAACTTCCCAGGATGATGAACGACCAGATCTTGGGAATGCACGGATTGTAGTTACTGGTGGCCAAGCACTAAAGAGTTGTGAGAACTTTAAATTGATTGAAGATCTAGCCAAGAAACTTGTTGCtgctgTTGGTGCAACTCGTGCTGCCGTTGATGCAGGATATGTTCCAAATGATCTCCAGGTAGGGCAAACTGGAAAGATTGTTGCTCCTGAACTCTATATGGCTTTTGGTGTATCTGGAGCTATTCAACACTTGGCAGGGATGAGAGATTCCAAAGTCATTGTTGCTGTTAACAATGATGCTGATGCTCCTATATTTCAGGTTGCTGATTATGGACTGTTTGAGGTGATACCAGAGTTACTGGAGAAACTCCCTGAGAAAAAATAA 1056 0.4574 MATRALLGAIKKRAVSFPAFPGHSSYRHGSTLVVAEHEGGFIKPPSLSALAAATCLPDPDSSVSVLLAGSGPSLHQAASHAASCHPSISKVLVADSDKFKNPLAEPWAKLVHLLQQSSGYSHIIAAANSFGKNVMPRAAALLDVSPITDVTGISDSNTFANICWKCTLNHRYTGANPCILTIRSTSFPVPQKSVDSKSNEASISQVDLSTFDEDLDKSRYISQTSQDDERPDLGNARIVVTGGQALKSCENFKLIEDLAKKLVAAVGATRAAVDAGYVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNNDADAPIFQVADYGLFEVIPELLEKLPEKK 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01213 351 Gene3D - 228 350 - -
Gma12g01213 351 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 30 204 - -
Gma12g01213 351 Pfam Electron transfer flavoprotein domain 31 200 IPR014730 -
Gma12g01213 351 ProSitePatterns Electron transfer flavoprotein alpha-subunit signature. 295 321 IPR018206 -
Gma12g01213 351 PANTHER ELECTRON TRANSFER FLAVOPROTEIN SUBUNIT ALPHA, MITOCHONDRIAL 24 349 - -
Gma12g01213 351 SMART ETF_2 31 215 IPR014730 -
Gma12g01213 351 Gene3D HUPs 30 227 IPR014729 -
Gma12g01213 351 SUPERFAMILY DHS-like NAD/FAD-binding domain 231 346 IPR029035 -
Gma12g01213 351 Pfam Electron transfer flavoprotein FAD-binding domain 232 312 IPR014731 -
Gma12g01213 351 PANTHER ELECTRON TRANSFER FLAVOPROTEIN ALPHA 24 349 IPR001308 GO:0009055|GO:0050660
Gma12g01213 351 PIRSF Electra_flavoP_a 28 351 IPR001308 GO:0009055|GO:0050660
Gma12g01213 351 CDD ETF_alpha 30 207 IPR033947 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01213 Gma-Chr12 15798203 15802634 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01213 K03522 - gmx:100793964 620.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01213 12 15798203 15802634 Gma12g01213 12 15798203 15802634 ECH