Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01210 ATGGCTCTTTCCTGCAAACATCCACACCTGTTCAACCATATTAGGACTTTTGTGAATGTGAAGGTGAAATGGGTCCAAGACCCATATCTTGATAATGCAGTCCTGAAAGAGAAAGATCTCAAACAGACAATTTCCCTCAGGAACCAAATCATTTCATCTCCTTCCAAATCCCTCTCCATCTATACTGCTTCTCAACTAAAAGCTTCCCTCAACCTTCCCACTACAACTACCAAATTCGTTGACAAATATCATTGTGTTTTCTCACAATTTCAACCTGGTCCTGGTCTTCCTCCAGTTGTCAAGCTCACTCCTCTAGCCTTGTCCCTCCACAAAGAAGAAATGGCTGTTCATAACTCTCCCATTAATCGTGAAGACACTGTTCAGAGGCTCGCGAGGCTTCTAATGCTTGCTGGCATGTCAAAATTGCCTCTTTATGTGATTGAGAAGCTAAAATGGGATATGGGACTTCCTCACGATTATGTGACAACCCTTTTGGCTGAATACCCTGATTATTTTGATGTTTGTGTTGTGGAAGATCCATCATCTGGAAAAGAATTACTTGCTTTAGAGCTTGTATCGTGGAAAAAAGAGCTTTCTGTGTCTGAGATAGAAAAGAGGGCAATTAGCTTGGGCTATAGTGGAGATAAAAGAAGGCATGATATTGCATTTCCCATATTTTTGCCAAAAGGTTTTGATTTAGAGAAGAGGGTGAAGACTTGGGTTGAGAATTGGCAAAAGTTGCCTTATGTTTCTCCATATGAAGATGCTTTTCATCTTGACTCAAATAGTGACCAAGCAGAGAAGTGGACAGTGGCAATTTTGCATGAGTTGCTTTCTCTTTTTGTGTCAAAGAAGACAGAGAGAGACAATTTACTATGTTTTGGAGAGTGTTTGGGGTTGGCCTTGAGATTTAAGAAGGCTTTGGTTCATCATCCTGGTATATTTTACATTTCCAATAAGATTAGGACTCAGACTGTTGTACTTAGAGAGGCTTATAGAAAGGATTTTTTGGTCAAGAATCATCCATTGGTGGTGGCGCTAATGCTACTGGAGTTATCAATCAGACAATTGCAGCAGAGTGGAATGGGCATCTTCCATTCCTTGCTGATGCGCATGTGCTTGCAGGACATTAGTTTCTTCCTCTTTTTTGCTCGGCGTTTGTATTCAAGTGAACGTGTATCAGACATGAAAATATTCAGTGGATGGCATCGTTTTGTTTTTGGTCTTCCTTTGATTTTCCTCCTTACTCATTTGTTTTCTGTCAGGGAATTGCACACAAACTCAAAAATGGAGGAACCCCGCAAGCAACTAAACAAGAAATTGGATCATCTGGTTCTTGGTCCTGCTGCTGGACAAGGCTTGTCAAATCGTTTGCAATGCCAAGGGACAAAATCACTTAATAGGATCCATTCTTCTAACAGCAGATCAGGTGTAGATGGAAGTATCACATTTGTCACTGTCTTTACCATTTATAATTCTTCTCTCAATGATGTAGACGATAAATCATTAAATACAATTGTTGGCAATGCTTCATATAATAAGTTTGGCAGGTCCATGGCTTTGTTGAATGTCTTCATTAACTTCATTCAGGTTGCAATGCGCCAGAGCAAAGTGATTATTCTGACAGATCCAGTGTCTGACCTTTCAGTGCAACGAAACGGGGTATCTCTGTATCCTATAGAAGGTGAATATTCACGAGACAAGTTGATGCTTCAAAGGATCAGGTCTTATATTACCTTTTTAGAAACAAGGCTCCAGAATCTTTCTCAGAAGCCGAAGAATATCACTCATTACATCTTCACTGATTCTGATATGGCAGTGGTTGATGATTTAGGGCAGATTTTCCATGACCATCCTAATTTTCATGTGGCTCTGACCTTTAGGAACAATAAGGCTCAACCTTTGAATTCAGGATTCATTGCAGTAAGGGGTACCCCGGAAGCAATTTTAAGGGCAAAGCTTTTCCTGCAAGAGGTCTTGAAAGTTTACACCACAAAATATAAAAATGCTTCCCGCATGCTGGGTGATCAGTTAGCTCTTGCTTGGGTTGTGAAGTCAAAACCTCATTTTGACGCCAGCAGGTTTGCCAAAGCACCTGCTTTCTCTGAAGATATTGGGGGTACTTCAGTATTGTTCTTACCTTGCTCTCTGTACAATTGGACTCCGCCTGAGGGTGCTGGTCAATTTCATGGCATGCCATTGGATGTTAAGGTTGTTCATTTTAAAGGATCAAGAAAACGTCTAATGCTCGAATCTTGGAACTTTTATTCCTCATCTCTTGAGGTTTCAGACATGTTATGTCTCATTTTGGGAAGTGGGAGAACCAAATATGACTTTTGA 2340 0.4051 MALSCKHPHLFNHIRTFVNVKVKWVQDPYLDNAVLKEKDLKQTISLRNQIISSPSKSLSIYTASQLKASLNLPTTTTKFVDKYHCVFSQFQPGPGLPPVVKLTPLALSLHKEEMAVHNSPINREDTVQRLARLLMLAGMSKLPLYVIEKLKWDMGLPHDYVTTLLAEYPDYFDVCVVEDPSSGKELLALELVSWKKELSVSEIEKRAISLGYSGDKRRHDIAFPIFLPKGFDLEKRVKTWVENWQKLPYVSPYEDAFHLDSNSDQAEKWTVAILHELLSLFVSKKTERDNLLCFGECLGLALRFKKALVHHPGIFYISNKIRTQTVVLREAYRKDFLVKNHPLVVALMLLELSIRQLQQSGMGIFHSLLMRMCLQDISFFLFFARRLYSSERVSDMKIFSGWHRFVFGLPLIFLLTHLFSVRELHTNSKMEEPRKQLNKKLDHLVLGPAAGQGLSNRLQCQGTKSLNRIHSSNSRSGVDGSITFVTVFTIYNSSLNDVDDKSLNTIVGNASYNKFGRSMALLNVFINFIQVAMRQSKVIILTDPVSDLSVQRNGVSLYPIEGEYSRDKLMLQRIRSYITFLETRLQNLSQKPKNITHYIFTDSDMAVVDDLGQIFHDHPNFHVALTFRNNKAQPLNSGFIAVRGTPEAILRAKLFLQEVLKVYTTKYKNASRMLGDQLALAWVVKSKPHFDASRFAKAPAFSEDIGGTSVLFLPCSLYNWTPPEGAGQFHGMPLDVKVVHFKGSRKRLMLESWNFYSSSLEVSDMLCLILGSGRTKYDF 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01210 779 SUPERFAMILY Nucleotide-diphospho-sugar transferases 521 747 IPR029044 -
Gma12g01210 779 Coils Coil 571 591 - -
Gma12g01210 779 PANTHER POLYPHOSPHATIDYLINOSITOL PHOSPHATASE 396 779 - -
Gma12g01210 779 Pfam Plant organelle RNA recognition domain 26 345 IPR021099 GO:0003723
Gma12g01210 779 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 519 763 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01210 Gma-Chr12 15720899 15734661 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01210 - - gmx:100785469 820.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01210 12 15720899 15734661 Gma06g02496 06 47434752 47447018 GST