Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01194 ATGACCAGAAAAGAGTGTCATCCATTGTTAAGGGGTGGGAGAGGGGATAGCAAATATAAACATGGATTTTCTGCAGCTGAGATGGAGTCACTGGCAAGCATATGTGAGGTTGTGTTGCCTCCTTTGCCTATGGATGCTCTTAAGATCAGAAAGGAAGACCAAATTGATGATTATGATTCTAGCAAGAGTCTCAAGTCCTTCTGGGACATTTCTGCTTCTCGCTATCCAATCCCTCATGAGGTTGCTGAGATGTTAACGAAGAGGAGCTTAATTGAAGCAGTAATACTGATTAGAGTAGTTTTATGGCTGCTGGCAACAAGGTTGGGAACCTTGTTGCTCTGTGGTTTCCTCTGTCTTGGTGAAAAATGGCCCTATGTCAACAACTTCTCAAACATATCTTTGGAGAAAAGAGAAATGGTTATGCAGAAGTGGCTGAAACATAGGTTCCTCACACCTATTAGACTGGCCTTTGCTTACATCAAAGTCTTGTGTCTCTTTGTTTTTTTCTCTTGGGTTGATGAAAATGGTGACAACCCAGCATGGAAAGCCATTGGATATGAGGTACCAGCTGATGAAAACTTGACCAATGCCTCCAAAACTAGGCCCCTTGAAAAGGGGATTATAGAAACCATGAATGAATCTGACTCCGCTCTTCAACAATCTCTTGCTAACAAAGGCCTTAATGTTACACTGGACTCAAAAAGCAACATCCTCAAAGTCAAATGTGATGCACTAGTTGTTGGTTCTGGTTGTGGAGGAGGTGTTGCGGCTGCTGTTCTTTCAAGTGCTGGCTACAAGGTGGTTGTTCTTGAGAAAGGAAACTATTTTTCTACTCAGGATTATTCATCTCTAGAAGGTCCTTCCATGAATCAACTATATGAAACTGGAGGGATCCTTGCTTCTGTGGACTCAAGAGTGCTAGTTTTGGCAGGATCAACAGTGGGTGGTGGCTCTGCTGTTAATTGGTCAGCCTGCATTAAGACCCCACACAAGGTGCTAAATGAGTGGTCTGAGAATCACAAGCTTCCCTTCTTTTCAAGCCAAGAATATCTCTCCGCAATGGAAACTGTGTGTGAaaggattggtgtaacagaaaactgtacacaagagggattccaaaaccaagtgctgagaaaagggtgtcaaaatcttggcctcaaagttgactatgtgccaagaaactcctcagggaatcactactgtggctcatgtggttatggctgtccgaaaggagagaaacaagggactcaagctacatggcttgtagatgcagttgaaagagatgcagTAATAATAACAGGATGCAAAGCTGAGAGGTTCTTGTTGGAAAGCAACAGGAGTGGAAATGGCAGAAAGAAGAAATGTTTGGGAGTGATGGCAAAAGCATTAAACAGCAGAGTCACAATGAAGTTACAAATTGAGGCCAAGGTGACAATTTCTGCAGGTGGGGCACTTTTGACACCCCCTTTGTTAATCTCTAGTGGACTAAAAAACAAGAACATAGGTAAAAACCTTCATCTCCACCCTGTGCTAATGACATGGGGATACTTTCCAGAATCAAATGATTCAGAATTCAAAGGAAAAGTCTACGAGGGAGGTATAATAACATCAGTCCACAAAGTGCCATCAACAGACTCCAATTCAGATTCAAGGGCAATAATTGAAACCCCTTCGCTAGGACCAGCTTCCTTTGCAGCACTGTGTCCTTGGGAGTCAGGACTAGACTTTAAGGAAAGAATGCTGAATTACCCTAGAACTTCACATTTGATAACAATAATAAGAGACATGGCTTGTGGACAGGTATCAACAGAAGGAAGGATCAGCTACAAGCTGAATGAAATTGACAAGGAGAACATGAAGGCTGGCTTGAAACAAGCACTGAAGATTCTTATAGCTGCAGGAGCAGTTGAGGTAGGTACACACAGAAGTGATGGTCAGAGACTTAAGTGTGATGGCATTGGTGAAAATGAAGTGCAAGAGTTCTTGGACAGTGTGTGTCCAATGGAGGGGGCACTTTCACCAGGTGAGTATTGGAACATATATTCTTCTGCACATCAAATGGGGAGCTGCAGAATGGGAGTCAATGAGAAAGAAGGTGCAGTTGATGAAAATGGTGAGACATGGGAGGCTGAAGGGTTGTTTGTTTGTGATGCTAGTGTGCTTCCAAGTGCTGTTGGTGTCAATCCCATGATCACGGTCCAATCAACTGCATACTGCATCTCTAATAGAATAGCAGATTATCTTAGAAGGGATTAA 2256 0.3879 MTRKECHPLLRGGRGDSKYKHGFSAAEMESLASICEVVLPPLPMDALKIRKEDQIDDYDSSKSLKSFWDISASRYPIPHEVAEMLTKRSLIEAVILIRVVLWLLATRLGTLLLCGFLCLGEKWPYVNNFSNISLEKREMVMQKWLKHRFLTPIRLAFAYIKVLCLFVFFSWVDENGDNPAWKAIGYEVPADENLTNASKTRPLEKGIIETMNESDSALQQSLANKGLNVTLDSKSNILKVKCDALVVGSGCGGGVAAAVLSSAGYKVVVLEKGNYFSTQDYSSLEGPSMNQLYETGGILASVDSRVLVLAGSTVGGGSAVNWSACIKTPHKVLNEWSENHKLPFFSSQEYLSAMETVCERIGVTENCTQEGFQNQVLRKGCQNLGLKVDYVPRNSSGNHYCGSCGYGCPKGEKQGTQATWLVDAVERDAVIITGCKAERFLLESNRSGNGRKKKCLGVMAKALNSRVTMKLQIEAKVTISAGGALLTPPLLISSGLKNKNIGKNLHLHPVLMTWGYFPESNDSEFKGKVYEGGIITSVHKVPSTDSNSDSRAIIETPSLGPASFAALCPWESGLDFKERMLNYPRTSHLITIIRDMACGQVSTEGRISYKLNEIDKENMKAGLKQALKILIAAGAVEVGTHRSDGQRLKCDGIGENEVQEFLDSVCPMEGALSPGEYWNIYSSAHQMGSCRMGVNEKEGAVDENGETWEAEGLFVCDASVLPSAVGVNPMITVQSTAYCISNRIADYLRRD 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01194 751 Pfam GMC oxidoreductase 243 510 IPR000172 GO:0016614|GO:0050660
Gma12g01194 751 PIRSF Lg_Ch_AO 9 751 IPR012400 GO:0046577
Gma12g01194 751 SUPERFAMILY FAD/NAD(P)-binding domain 241 749 IPR036188 -
Gma12g01194 751 Gene3D - 614 751 IPR036188 -
Gma12g01194 751 Gene3D - 227 546 IPR036188 -
Gma12g01194 751 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 3 751 - -
Gma12g01194 751 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 3 751 - -
Gma12g01194 751 Pfam GMC oxidoreductase 606 739 IPR007867 GO:0016614
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01194 Gma-Chr12 15287938 15292542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01194 83 748 Acyl Lipid Metabolism Gene Families AT3G23410 65.373 0.0 874
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01194 K17756 - gmx:100776182 1475.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01194 12 15287938 15292542 Gma06g02506 06 47753307 47758037 GST