Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01179 ATGTGTTCATTTAGCCAAAAAAAAAATATTTTAGTTGTGTTCCTTGTTCTCACTGTGTGGACATCCCAAGTAATGTCTCGCAGGTTGTCTGAGGCCTACTCATCAGTGAAACATGAGAAGTGGATGGCACAGTATGGTAAGGTTTACAAGGATGCTGCCGAGAAGGAAAAACGTTTCCAAATATTTAAAAACAATGTGCACTTCATTGAGTCTTTCCATGCTGCTGGGGACAAACCTTTCAACCTTAGCATTAACCAATTTGCTGACCTTCATAATGAAGAATTTAAGGCTTTACTAATTAATGGTCAGAAGAAGGAACATAACGTGCGGACAGCAACAGCAACAGAAGCATCGTTCAAGTATGACAGTGTGACTAGGATTCCTTCTAGCTTGGACTGGAGGAAAAGAGGTGCTGTTACTCCAATCAAGGACCAAGGAACATGTCGAAGTTGTTGGGCATTTTCAACTGTGGCTACAATTGAGGGTCTCCATCAAATAACTAAAGGTGAATTAGTGTCTCTATCAGAGCAAGAACTAGTTGATTGTGTTAAAGGTGACAGCGAAGGATGCTATGGTGGATATGTGGAAGATGCCTTTGAATTCATTGCCAAGAAAGGTGGAGTAGCAAGTGAAACACACTACCCCTACAAAGGAGTTAACAAGACTTGCAAGGTTAAGAAGGAAACTCATGGTGTAGTCCAGATTAAAGGGTATGAGCAAGTTCCTTCAAATAGTGAAAAGGCTCTCCTAAAAGCTGTGGCACATCAACCAGTGTCAGCTTATGTTGAAGCTGGAGGATATGCTTTCCAATTTTACTCAAGTGGGATTTTTACAGGAAAGTGTGGAACTGATATAGATCATTCTGTTACCGTAGTTGGTTATGGAAAAGCTCGTGGTGGCAATAAATATTGGCTGGTAAAGAATTCATGGGGCACTGAATGGGGTGAGAAAGGGTATATAAGGATGAAGAGAGATATACGTGCCAAGGAAGGTTTATGTGGAATTGCTACGGGTGCCTTATATCCAACTGCTTGA 1035 0.4116 MCSFSQKKNILVVFLVLTVWTSQVMSRRLSEAYSSVKHEKWMAQYGKVYKDAAEKEKRFQIFKNNVHFIESFHAAGDKPFNLSINQFADLHNEEFKALLINGQKKEHNVRTATATEASFKYDSVTRIPSSLDWRKRGAVTPIKDQGTCRSCWAFSTVATIEGLHQITKGELVSLSEQELVDCVKGDSEGCYGGYVEDAFEFIAKKGGVASETHYPYKGVNKTCKVKKETHGVVQIKGYEQVPSNSEKALLKAVAHQPVSAYVEAGGYAFQFYSSGIFTGKCGTDIDHSVTVVGYGKARGGNKYWLVKNSWGTEWGEKGYIRMKRDIRAKEGLCGIATGALYPTA 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01179 344 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 29 343 - -
Gma12g01179 344 Pfam Cathepsin propeptide inhibitor domain (I29) 38 95 IPR013201 -
Gma12g01179 344 SMART pept_c1 127 343 IPR000668 GO:0006508|GO:0008234
Gma12g01179 344 PANTHER SENESCENCE-ASSOCIATED GENE 12 29 343 - -
Gma12g01179 344 SMART Inhibitor_I29_2 38 95 IPR013201 -
Gma12g01179 344 SUPERFAMILY Cysteine proteinases 36 343 IPR038765 -
Gma12g01179 344 CDD Peptidase_C1A 128 342 IPR039417 -
Gma12g01179 344 Pfam Papain family cysteine protease 127 342 IPR000668 GO:0006508|GO:0008234
Gma12g01179 344 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 285 295 IPR025660 -
Gma12g01179 344 Gene3D Cysteine proteinases 17 344 - -
Gma12g01179 344 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 303 322 IPR025661 -
Gma12g01179 344 PRINTS Papain cysteine protease (C1) family signature 145 160 IPR000668 GO:0006508|GO:0008234
Gma12g01179 344 PRINTS Papain cysteine protease (C1) family signature 287 297 IPR000668 GO:0006508|GO:0008234
Gma12g01179 344 PRINTS Papain cysteine protease (C1) family signature 303 309 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01179 Gma-Chr12 15068516 15069951 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01179 - - gmx:100817009 707.212