Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01176 TGAGGCAAACTACCCCTACACAGCAGTTGACGGAACTTATGACGCAAACAAAGAGGCTTCTCCTGCAGCTCAAATAAAGGGATATGAAACAGTACCTGCTAACAGTGAGGATGCACTGCAGAAAGCTGTTGCAAACCAACCCGTGTCAGTTACCATTGATGCCGGAGGATCCGCTTTCCAGTTCAACTCAAGTGGGGTTTTCACAGGACAATGTGGGACTCAACTAGACCATGGCGTTACTGCAGTTGGTTATGGTAGCACTGATGATGGCACTCAGTATTGGATTGTGAAGAATTCATGGGGCACACAATGGGGTGAAGAAGGTTACATAAGAATGCAACGAGGCACAGATGCCCAAGAAGGCCTATGTGGCATTGCCATGGATGCCTCGTACCCAACTGCTTAG 406 0.4828 EANYPYTAVDGTYDANKEASPAAQIKGYETVPANSEDALQKAVANQPVSVTIDAGGSAFQFNSSGVFTGQCGTQLDHGVTAVGYGSTDDGTQYWIVKNSWGTQWGEEGYIRMQRGTDAQEGLCGIAMDASYPTA 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01176 134 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 75 85 IPR025660 -
Gma12g01176 134 CDD Peptidase_C1A 1 132 IPR039417 -
Gma12g01176 134 Pfam Papain family cysteine protease 1 133 IPR000668 GO:0006508|GO:0008234
Gma12g01176 134 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 93 112 IPR025661 -
Gma12g01176 134 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 1 133 - -
Gma12g01176 134 SMART pept_c1 1 133 IPR000668 GO:0006508|GO:0008234
Gma12g01176 134 PANTHER PEPTIDASE C1A, CYSTEINE PEPTIDASE, ASPARAGINE ACTIVE SITE PROTEIN-RELATED 1 133 - -
Gma12g01176 134 Gene3D Cysteine proteinases 1 134 - -
Gma12g01176 134 SUPERFAMILY Cysteine proteinases 1 134 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01176 Gma-Chr12 15025391 15025796 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01176 - - gmx:100815212 274.248