Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01175 ATGGCTTCCATTGGCAAAAAGCAGCACATTTTAGCTCTTGTGCTCCTTCTCCCAATCTGCATTTCCCAAGTAATACATGAGCAATGGATGAAAAAATATGGAAAAGTATATAAGGATGCTGCTGAGAAGCAAAAACGTTTACTGATATTCAAAGACAATGTTGAATTCATTGAATCCTTCAATGCTGCCGGGAACAAACCTTACAAGCTTAGCATCAATCACCTCACTGACCAAACAAACGAGGAATTTGTGGCTTCCCATAATGGATACAAACACAAGGGATCACATTCACAAACACCATTCAAATATGAAAACATCACTGtTGGATTGGAGGGAAAATGGAGCTGTCAAGCAATGAAGGACCAAGGCCAATGTGGTAACTGCTGGGCATTTTCAACGGTTGCGACAACAGAAGGTATCTACCAAATAACTACAAGTATGTTAATGTCCCTTTCGGAGCAAGAGTTAGTGGATTGCGACAGCGTGGATCATGGTTGTGATGGAGGTTACATGGAAGGTGG 521 0.4146 MASIGKKQHILALVLLLPICISQVIHEQWMKKYGKVYKDAAEKQKRLLIFKDNVEFIESFNAAGNKPYKLSINHLTDQTNEEFVASHNGYKHKGSHSQTPFKYENITVGLEGKWSCQAMKDQGQCGNCWAFSTVATTEGIYQITTSMLMSLSEQELVDCDSVDHGCDGGYMEG 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01175 173 PANTHER PEPTIDASE C1A, CYSTEINE PEPTIDASE, ASPARAGINE ACTIVE SITE PROTEIN-RELATED 20 172 - -
Gma12g01175 173 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 122 133 IPR000169 -
Gma12g01175 173 Gene3D Cysteine proteinases 101 173 - -
Gma12g01175 173 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 20 172 - -
Gma12g01175 173 SUPERFAMILY Cysteine proteinases 24 172 IPR038765 -
Gma12g01175 173 Pfam Cathepsin propeptide inhibitor domain (I29) 26 83 IPR013201 -
Gma12g01175 173 Pfam Papain family cysteine protease 115 172 IPR000668 GO:0006508|GO:0008234
Gma12g01175 173 Gene3D - 22 92 - -
Gma12g01175 173 SMART Inhibitor_I29_2 26 83 IPR013201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01175 Gma-Chr12 15020870 15025355 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01175 - - gmx:100817873 307.76