Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01089 ATGGAATCACGTCCTTTGCACATAGCAATGTATCCATGGTTAGCCATGGGTCACCAAACCGCATTCCTCCACCTATGCAACAAGTTAGCGATAAGGGGCCACAAAATCTCCTTCATCACCCCACCAAAAGCACAAGCCAAGTTAGAAGCATTCAACCTGCACCCAAATTCAATCACCTTTGTCACCATCACGGTTCCACACGTTGAAGGCCTTCCCCCAGATGCACAAACCACCGCAGATGTCACTTACCCTTTGCAGCCGCAGATCATGACAGCCATGGATCTGACTAAAGATGACATAGAAACCCTTCTCAGTGGCCTCAAACCTGATCTTGTCTTCTACGACTTCACACATTGGATGCCAGCATTGGCAAAGAGTTTAGGCATCAAGGCTGTGCATTATTGCACTGCTAGTTCTGTGATGGTTGGTTACACTCTCCCACCGGCTAGATATCACCAAGGAACAAACCTAATAGAAAGTGACCTCATGGAACCCCCAGAAGGGTACCCTGACTCATCAATCAAGCTCCATGCTCATGAGGCTCGTGCCTTTGCTGCGAAAAGAAAGGACACGTTTGGGAGCAATGTTCTTTTCTACGATCGCCAATTCATTGCATTGAATGAAGCCGATGTGTTGGCATACAGAACATGCAGAGAAATCGAAGGGCCATATCTTGATTACATTGAAAAGCAGTTCAACAAGCCTGTGCTAGCAACCGGGCCAGTTATTCTAGACCCACCAACTTCAGATTTGGAGGAGAAATTTTCCACATGGCTTGGAGGGTTTGAGCCTGGCTCAGTGGTCTATTGTTGCTTTGGAAGTGAGTGCACTTTGGGGCCAAACCAGTTCCAAGAGCTGGTGCTTGGTCTTGAGCTAACTGGCATGCCATTCTTGGCAGCAGTGAAGGCCCCATTAGGGTTTGAGACAGTGGAATCAGCAATGCCTGAGGGGTTTGAAGAAAGGGTGAAAGGGAGAGGGTTTGTGTATGGTGGGTGGGTTCTGCAGCAGTTGATTCTGGCACACCCTTCTGTGGGGTGCTTCATCACACACTGTGGGTCAGGGTCCTTGTCTGAGGCATTGGTGAACAAGTGTCAGTTGGTGCTGTTGCCTAATGTTGGTGACCAGATCCTTAATGCAAGGATGATGGGGAACAACTTGGAGGTTGGTGTGGAAGTGGAGAAGGGTGATGAGGATGGAATGTACACCAGAGAGAGTGTGTGCAAAGCTGTGAGCATTGTGATGGATGGTGAGAATGAAACCAGCAAAAGGGTGAGGGGTAATCATGCTAGGATCAGAGAGTTGCTGCTTAACAAAGATTTGGAGTCCTCTTATGTTGACAGTTTCTGTATGAGGCTTCAAGAGATTGTTGAGGGAATAGACTTGTAG 1386 0.4798 MESRPLHIAMYPWLAMGHQTAFLHLCNKLAIRGHKISFITPPKAQAKLEAFNLHPNSITFVTITVPHVEGLPPDAQTTADVTYPLQPQIMTAMDLTKDDIETLLSGLKPDLVFYDFTHWMPALAKSLGIKAVHYCTASSVMVGYTLPPARYHQGTNLIESDLMEPPEGYPDSSIKLHAHEARAFAAKRKDTFGSNVLFYDRQFIALNEADVLAYRTCREIEGPYLDYIEKQFNKPVLATGPVILDPPTSDLEEKFSTWLGGFEPGSVVYCCFGSECTLGPNQFQELVLGLELTGMPFLAAVKAPLGFETVESAMPEGFEERVKGRGFVYGGWVLQQLILAHPSVGCFITHCGSGSLSEALVNKCQLVLLPNVGDQILNARMMGNNLEVGVEVEKGDEDGMYTRESVCKAVSIVMDGENETSKRVRGNHARIRELLLNKDLESSYVDSFCMRLQEIVEGIDL 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01089 461 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 331 417 IPR002213 GO:0008194
Gma12g01089 461 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 441 - -
Gma12g01089 461 CDD GT1_Gtf-like 6 433 IPR002213 GO:0008194
Gma12g01089 461 Gene3D Glycogen Phosphorylase B; 256 436 - -
Gma12g01089 461 PANTHER GLYCOSYLTRANSFERASE 2 455 - -
Gma12g01089 461 ProSitePatterns UDP-glycosyltransferases signature. 332 375 IPR035595 -
Gma12g01089 461 PANTHER UDP-GLYCOSYLTRANSFERASE 79B30 2 455 - -
Gma12g01089 461 Gene3D Glycogen Phosphorylase B; 1 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01089 Gma-Chr12 12982308 12984293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01089 6 461 Glycosyltransferase AT5G54010 46.827 1.36e-155 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01089 K22794 K12933 gmx:100780270 932.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01089 12 12982308 12984293 Gma06g02568 06 48890644 48892595 GST