Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01028 ATGGACAACTTCGAAGATGCTACAGAGCCAGTGAGTCCTAGTGGACGATTCTTCAACACCACGGTGCTATGTGCGTATGTTTTTGGCTTCTTAGAATCAGAAGTTCCAATTGAATTCTCTCAAGCCAAGTATTTGTTCGAAGATGTCTTTCTACCCGTCAATCCACACTTTTCTTCCATAATGGTGAGAGATGAAGAAGGAGAAATGAAATGGAAAAGGGTAGAGGTGAAGTTCGAAGATCACGTAAAGATTCCAACGTTCCCCGAAAACGAGTCACTAGAATTGTATGACCAATATTTTGATGACTATGTGACAAAGATATTAATGGAAAGGACACCACAAGATAAACCACTTTGGGAAATTCATGTGATCAAATACCCTACAAGCAATGCTGCTGGCACCTTAATATTCAAACTTCACCATGCACTTGGAGATGGTTACTCCCTAGTGGGTGCTCTTCTCTCTTGTCTTCAGAGAGCTGATGACCCTTCTCTTCCTCTTTCGTTTCCCTCCCGAAAATCCTCGGCATCTTCATCTCCTTCCAAGAAGGGCTTCTTCAGGTTGTTCTCTTCAACTTTGTTCTCCTTTTTTAACTCTATTTCGGATTTTGGATGGAGCATAGTGAAAAGCTCAATTGTTGAAGATGATGAGACACCCATAAGGAGTGGTGAGGAAGGTGTTGAGTCTCTGCCTTGTGTGATATCAAACATATCCTTTGATCTTGATCAAGTGAAGAAAATCAAGTCCAAGCTAGGAGTGACAGTAAACGATGTAATTACTGGGGCAATTTTCTATGGGATTAGGCTGTACATGCAAGAGATTGACAATAAGGCAGGCAAAGCAAATTCCACAGGATTGGTGATGCTTAGTACTAGAAACATTGGAAGTTACCAATCAATCCAAGAAATGATGAAGGCTGATTCCAAATCTCCTTGGGGGAATCATATTTCTTTCTTGCACGTACCCATACCTAAGCTAAGCCAAGCCAGCCTATCCAACCCCCTTGAATTTGTTTGGAAAGCCCAAAAAATAATCAAGAGGAAGAGAAAGTCTTTCACTGTTTTTCTCATTGAATGGCTTTTAGATATGGAGCTGAAATTAAGAGGACACGAGGCCGTGGCTAAACATATCTATGGGACACTAAGAAACTCAAGTGTTGTCGTATCCAACTTGATTGGACCAATAGAACCTATGGCTTTGGCAAATCATCCTGTGAAAGGCTTGTATTTCACAATGACTGGTGGACCCGAGAGAGGAGAGATTCGTGAACAAGGTCAAGATCACAAACCATCCTCGTCTTCGAGTTCGTTCCCGGTGCCAGCTTCACCGTCAGCCTCAACAACCATCGTCTTTGGTGCCGTGATCTGA 1368 0.4232 MDNFEDATEPVSPSGRFFNTTVLCAYVFGFLESEVPIEFSQAKYLFEDVFLPVNPHFSSIMVRDEEGEMKWKRVEVKFEDHVKIPTFPENESLELYDQYFDDYVTKILMERTPQDKPLWEIHVIKYPTSNAAGTLIFKLHHALGDGYSLVGALLSCLQRADDPSLPLSFPSRKSSASSSPSKKGFFRLFSSTLFSFFNSISDFGWSIVKSSIVEDDETPIRSGEEGVESLPCVISNISFDLDQVKKIKSKLGVTVNDVITGAIFYGIRLYMQEIDNKAGKANSTGLVMLSTRNIGSYQSIQEMMKADSKSPWGNHISFLHVPIPKLSQASLSNPLEFVWKAQKIIKRKRKSFTVFLIEWLLDMELKLRGHEAVAKHIYGTLRNSSVVVSNLIGPIEPMALANHPVKGLYFTMTGGPERGEIREQGQDHKPSSSSSSFPVPASPSASTTIVFGAVI 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01028 455 MobiDBLite consensus disorder prediction 428 444 - -
Gma12g01028 455 PANTHER O-ACYLTRANSFERASE (WSD1-LIKE) FAMILY PROTEIN 2 421 IPR045034 GO:0008374|GO:0045017
Gma12g01028 455 MobiDBLite consensus disorder prediction 416 444 - -
Gma12g01028 455 Pfam Wax ester synthase-like Acyl-CoA acyltransferase domain 101 259 IPR004255 GO:0004144|GO:0045017
Gma12g01028 455 Pfam WS/DGAT C-terminal domain 312 417 IPR009721 GO:0004144
Gma12g01028 455 PANTHER O-ACYLTRANSFERASE WSD1-LIKE PROTEIN 2 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01028 Gma-Chr12 11600755 11605621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01028 1 405 Acyl Lipid Metabolism Gene Families AT5G16350 30.769 3.77e-51 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01028 - - gmx:100816273 808.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01028 12 11600755 11605621 Gma12g01028 12 11600755 11605621 ECH
Gma12g01028 12 11600755 11605621 Gma06g02615 06 49473712 49477310 GST