Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01022 ATGGAGCTCACTATTACACAGCCTGATGATTGGCATCTTCACCTCCGTGATGGTTCCCTTCTTGAAGCTGTCCTCCCTCACAGTGCGAAGCATTTTGGAAGGGCCATAGTAATGCCAAATTTGAAACCACCCATCACTACCACGTCTGCTGCTGTCGCTTATCGAGAGTCCATTTTGAAAGCAATACCTAAAGATAGCAACTTCACTCCTCTCATGTCACTTTACCTCACAGACGTGACTACCCCTGATGAGATTAAACTTGCAAAAAAAAGTGGACTTGTTTATGGTGTGAAGTTGTATCCTGCTGGTGCTACAACAAACTCCCAAGATGGTGTTACAGATCTTTTTGGAAATTGTTTTTCTGTTCTTGAGGAAATGGCTGAGCAAAATTTACCATTATTGGTTCACGGAGAGGTTACAGATTCAAACGTTGATATTTTTGACCGAGAAAAAGTCTTTATTGAAACAATTTTAATGCCTTTAATTCAAAGACTTCCACAGCTGAAGGTTGTGATGGAGCATATCACTACTGCAGATGCTGTTAAATTTGTAGAGTCTTGCAAAGAAGGTTATGTAGCAGCAACTGTTACACCACAGCATCTTCTTCTGAATCGTAATGCTTTGTTCCAAGGTGGCTTACAGCCTCACAATTACTGTCTTCCAGTGCTCAAAAGAGAGATCCATAGACAGGCTATTGTTTCGGCTGTCACTAGTGGAAGTAAACGATTTTTCCTTGGAACTGATAGTGCTCCACATGATAGGCGTAAAAAGGAATGTTCCTGTGGATGTGCTGGCATATACAACTCACCGGTTGCTCTATCACTATATGCCAAAGTTTTTGAAGAGGCTGGTGCACTTGATAAGCTAGAGGCTTTTACAAGCTTTAACGGACCTGACTTCTATGGCCTCCCCAGAAACAAGTCAAAGATTAAACTGAGGAAAGCTCCTTGGAAAGTACCTGATTATTTGTCATTTCCATTTGGAGACATCGTTCCCATGTTTGCTGGTGAAACCCTTGAATGGGAGGCATTGCCTTGTTGA 1041 0.4198 MELTITQPDDWHLHLRDGSLLEAVLPHSAKHFGRAIVMPNLKPPITTTSAAVAYRESILKAIPKDSNFTPLMSLYLTDVTTPDEIKLAKKSGLVYGVKLYPAGATTNSQDGVTDLFGNCFSVLEEMAEQNLPLLVHGEVTDSNVDIFDREKVFIETILMPLIQRLPQLKVVMEHITTADAVKFVESCKEGYVAATVTPQHLLLNRNALFQGGLQPHNYCLPVLKREIHRQAIVSAVTSGSKRFFLGTDSAPHDRRKKECSCGCAGIYNSPVALSLYAKVFEEAGALDKLEAFTSFNGPDFYGLPRNKSKIKLRKAPWKVPDYLSFPFGDIVPMFAGETLEWEALPC 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01022 346 Hamap Dihydroorotase [pyrC]. 1 344 IPR004721 GO:0004151|GO:0019856
Gma12g01022 346 ProSitePatterns Dihydroorotase signature 1. 10 18 IPR002195 GO:0016812
Gma12g01022 346 CDD DHOase 3 341 IPR004721 GO:0004151|GO:0019856
Gma12g01022 346 PIRSF Dihydroorotase 1 345 IPR004721 GO:0004151|GO:0019856
Gma12g01022 346 SUPERFAMILY Metallo-dependent hydrolases 2 342 IPR032466 -
Gma12g01022 346 PANTHER DIHYDROOROTASE 1 342 IPR004721 GO:0004151|GO:0019856
Gma12g01022 346 Gene3D - 1 343 - -
Gma12g01022 346 Pfam Amidohydrolase family 10 321 IPR006680 GO:0016787
Gma12g01022 346 ProSitePatterns Dihydroorotase signature 2. 246 257 IPR002195 GO:0016812
Gma12g01022 346 TIGRFAM pyrC_dimer: dihydroorotase, homodimeric type 2 342 IPR004721 GO:0004151|GO:0019856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01022 Gma-Chr12 11539296 11543452 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01022 K01465 - gmx:100815210 702.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01022 12 11539296 11543452 Gma12g01022 12 11539296 11543452 ECH
Gma12g01022 12 11539296 11543452 Gma06g02617 06 49482817 49486189 GST