Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00965 atggctttccaacacgaaaacgggtcgaatattgacccgaatcctattggggtggagacagcaatggcttcccagcacgaaaatgggtcggaaattgacccgaaccctactggggtggagacatcaatgtcttcccttcacgaaaacgggtcggaaattgatcagaaccttattggggcggagGCACATGAAGCGGAGGCTGAAAAGTTTGGAACTTTGGGTTGTGCTGGTCCTATTGAGGAAGGCTTGGAGAAGATCACTTTGGTGGGTTCCTCTCTTTCAGTTGAGGAGAACGGTGTTAAGGATGATAGTGAAATTGAAGTTGAAATTGAGAGTGAGAGTGAAAGTGAAAATTCAGAGTCTGAAAGCCCTTCTTCTGATTCTGGTAGCGGAAGTAGTAGTAGCAGCAGCGACAGTAGTAGTGATAGCGAGGACACCGACGATGATGATAAAGATGATGATGTGGAAGTTGAAGAAGGCGAGATAAGTGGTTCCGATGAAGAGAAAATGGTTAGTTGGAGCATGGCTGATGAGGATGATGATGAAGATGGTGATGTGGGAGGAGGACCCATCAGGTCAAAGAACGAGCTTCAGAATCTGCCTCCTGTTCCTCCGGTCGATGTGACTTTGGAACCACACCATCAAACACTGCCAGTGGGAATTGTTACGTCGATTCTTGGTGCTCAAGTCATTGTGGAAGGAGTGGAGAAGCATGGCCCTCTTAATGAGGGTTCTATTCTTTGGTTGACTGAAAGTAGAAAACCATTAGGTTTAATTGATGAAATTTTTGGACCAGTCAAGAATCCTTATTATGTTGTGAGATACAATTCTGAAAGTGAAGTCCCCACGGGGATCCATGAGGGAACCTTGATCTCCTTTGTTCCAGAATTTGCTGATCATGTGCTTAATAACAAGGATCTTTATAGGAAAGGGTATGATGCATCTGGTGCAGATGATGAAGAGTTGTCTGATGAAATGGAGTTTTCAGATGATGAGAAAGAGGCTGAATACAAGAGAATGCAAAAACAGACAAAGAGAGGCGCAAACGATCAAAATCATGGCAAGAAAAAAAACAACAGAAAGAAATTTTCACCGAAAGAGCATGCGGCACCTACCATCCATGCTGCACCAATGCTTCATCATGGAAACTGTCCTCCTTTTTCTGGCACTGGACAAGGTCTTATGGGGGGAACTACCCCACTTCCACCCTTAAACGTAGCTCCAACCTTTGCTACAAATGGAGTCTGGACAAACGGAACAACATTTCCACATCAGCAACAGTCTCCCATGCTTCCTAATGGATATCCCACAAATGGCATGCCATGGTACCCACAAAACCCTCAAATTTCTCCTCAGTTTCCTATGCCAGGAATTCCATTTCAACAGCAATTACATCCCAATCAGGGATCTCTTCCCACAACTATGCTACCTGGGATGCCCGATATGTTTGCTCAATCCCAATATGCAGCAGGACTTGCCGGTCAAAATCAAATGGCATTTGGGATGGGTTCACCCTTTCCACAGAGTCAGCCACCTATGTTTGCTGCACAGCAGGGTTTTCCATCCACCGAATTGCATTCCCAAAGAAACCTGAATTTTCATTCTAATACTATATCTGGCGCCCGATCTCAATTTCATCCGCGTTCAAATGCTAATCGTGGGAGAAAAACATTTCATGGTGCAGGTAGGAAAGGGTGGCGACCACCCAAGTGA 1713 0.3987 MAFQHENGSNIDPNPIGVETAMASQHENGSEIDPNPTGVETSMSSLHENGSEIDQNLIGAEAHEAEAEKFGTLGCAGPIEEGLEKITLVGSSLSVEENGVKDDSEIEVEIESESESENSESESPSSDSGSGSSSSSSDSSSDSEDTDDDDKDDDVEVEEGEISGSDEEKMVSWSMADEDDDEDGDVGGGPIRSKNELQNLPPVPPVDVTLEPHHQTLPVGIVTSILGAQVIVEGVEKHGPLNEGSILWLTESRKPLGLIDEIFGPVKNPYYVVRYNSESEVPTGIHEGTLISFVPEFADHVLNNKDLYRKGYDASGADDEELSDEMEFSDDEKEAEYKRMQKQTKRGANDQNHGKKKNNRKKFSPKEHAAPTIHAAPMLHHGNCPPFSGTGQGLMGGTTPLPPLNVAPTFATNGVWTNGTTFPHQQQSPMLPNGYPTNGMPWYPQNPQISPQFPMPGIPFQQQLHPNQGSLPTTMLPGMPDMFAQSQYAAGLAGQNQMAFGMGSPFPQSQPPMFAAQQGFPSTELHSQRNLNFHSNTISGARSQFHPRSNANRGRKTFHGAGRKGWRPPK 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00965 570 MobiDBLite consensus disorder prediction 121 140 - -
Gma12g00965 570 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1 13 563 IPR040309 GO:0000493|GO:0003723|GO:0005732|GO:0042254
Gma12g00965 570 MobiDBLite consensus disorder prediction 533 551 - -
Gma12g00965 570 Gene3D Probable tRNA pseudouridine synthase domain 188 294 IPR038664 -
Gma12g00965 570 MobiDBLite consensus disorder prediction 332 354 - -
Gma12g00965 570 MobiDBLite consensus disorder prediction 141 163 - -
Gma12g00965 570 MobiDBLite consensus disorder prediction 102 120 - -
Gma12g00965 570 MobiDBLite consensus disorder prediction 314 367 - -
Gma12g00965 570 MobiDBLite consensus disorder prediction 91 201 - -
Gma12g00965 570 SUPERFAMILY Translation proteins 218 279 IPR009000 -
Gma12g00965 570 MobiDBLite consensus disorder prediction 1 63 - -
Gma12g00965 570 Pfam Gar1/Naf1 RNA binding region 218 298 IPR007504 GO:0001522|GO:0042254
Gma12g00965 570 MobiDBLite consensus disorder prediction 21 52 - -
Gma12g00965 570 MobiDBLite consensus disorder prediction 533 570 - -
Gma12g00965 570 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1 13 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00965 Gma-Chr12 10080124 10082760 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00965 K14763 - gmx:102660668 1041.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00965 12 10080124 10082760 Gma12g00965 12 10080124 10082760 ECH
Gma12g00965 12 10080124 10082760 Gma06g02655 06 50075326 50078829 GST