Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00910 ATGGCCCTAGACAGCAGTTCCATGTTGCTAAATTTTTCCTTCACCCCACCACTTGTTAGTTTCAGCAAACATCAAAAACAACGAGGGATTAATCTTCTAGTGCGTAGAATTGGTTCCACCAGCCAGTATTACTGCTTGGCAACAAGCACAAACGTTCGTGAAAGAAAATCAGCCAATTACCAGCCTAACCTCTGGAATTATGATTTTTTGCAGTCATTGAAGAATGACTATGCGGATGTAAAATATGAGATAATGGCCAGGAAGCTGGAGGAAGTGAGGAGAATGATAAAGGATGAAAATTCAGAAATATGGGTCACACTAGATCTGATTGACAATGTGAAACGCCTGGGCCTCAGCTATCACTTTGACAAGGAGATAAGAGAAGCCCTTCATAGGTTTCTCTCTTTAGAAAGATGTAATGCCACAAATATTCACACAAGCCTGCATGAGACCGCTTTAAGCTTCAGGCTCCTTAGAGAATATGGTGATGATGTTTCAGCAGATGTATTTGAGAGGTTTGAGGACAACAACGGTAATTTCAAGGCAAGCCTTAGCAGAGATATGAAGGGAATGTTGAGTCTGTACGAGGCATCGTTTCTCAGTTATGAAGAAGAACTGATTCTGGATAAGACCAAGGCCTTCAGTAGCTTCCATCTAAGGGGTGCCCTCAAAGAAGGTAGAAGCAATAGTATGCTCTTAGAACAAGTGAATCATGCATTGGAGCTTCCACTGCATCACAGAATCCAAAGGCTTGAAGCCAGGTGGTATATTGAATCTTATGCTAAAAGAAAGGATGCAAATTGGGTGCTGCTTGAAGCAGCAAAACTAGATTTCAACATTGTGCAGTCAACACTGCAAAAGGACCTCCAAGAAATGTCAAGGTGGTGGAAACGGATGGGACTAGCTCCAAAGTTAAGCTTTAGCCGGGACAGGCTAATGGAGTGTTTCTTTTGGAGCATGGGAATGGCATTCGAGCCTCAGTTCAGTGATCTTCGCAAAGGTTTAACCAAAGTCACTTCTCTAATAACTACAATTGACGACGTTTATGATGTTTATGGCTCCTTGGATGAGCTAGAACTTTTCACAAAAGCCGTTGAAAGTTGGGATATTAAAGCTGTTCAAGTTATGCCGGAGTATATGAAGATATGTTTCCTTGCTCTCTACAACACTGTCAACGAATTCGCTTATGATGCCCTTAAAATCAAAGGACAAAATATCCTTCCCCATCTTACCAAGGCGTGGTCGGTTATGTTGAAAGCATTCTTGCAAGAAGCCAAGTGGTGCCGGGATAAATATTTGCCACCATTTGAAGACTATCTCAACAATGCATGGGTGTCTGTGTCTGGAGTAGTGATACTGACCCATGCCTATTTCTTGTTGAATGATAACATCACTAAGGATGCACTTGATTCCTTGGACAATTATCATGATCTTTTGCGTAGGCCATCCATTATTTTTCGACTTTGCAATGATTTGGGTACTTCAAGGGCTGAGTTACAAAGAGGTGAAGCAGCAAGCTCGATCGTGTGTAACATGCGTGAAAGTTGTGTAACTGAGGAGGGTGCTTACAAAAACATACACAGTTTGCTTGATGAAACTTGGAAGAAGATGAACAAAGATCGAGCCATGCATTCTCCTTTTTCAAAACCATTTGTGGAAGCAGCAATCAACCTTGCTAGAATCTCTCACTGCACATACCTTAATGGAGATGGCCATGGTGCCCCAGATATTGCAGCCAAGAATCGGATTCGGTCCTTGATAATTGAACCCATCCCACTTAGGGAGATAAATGCGGATATTGTTCAGTGA 1809 0.4207 MALDSSSMLLNFSFTPPLVSFSKHQKQRGINLLVRRIGSTSQYYCLATSTNVRERKSANYQPNLWNYDFLQSLKNDYADVKYEIMARKLEEVRRMIKDENSEIWVTLDLIDNVKRLGLSYHFDKEIREALHRFLSLERCNATNIHTSLHETALSFRLLREYGDDVSADVFERFEDNNGNFKASLSRDMKGMLSLYEASFLSYEEELILDKTKAFSSFHLRGALKEGRSNSMLLEQVNHALELPLHHRIQRLEARWYIESYAKRKDANWVLLEAAKLDFNIVQSTLQKDLQEMSRWWKRMGLAPKLSFSRDRLMECFFWSMGMAFEPQFSDLRKGLTKVTSLITTIDDVYDVYGSLDELELFTKAVESWDIKAVQVMPEYMKICFLALYNTVNEFAYDALKIKGQNILPHLTKAWSVMLKAFLQEAKWCRDKYLPPFEDYLNNAWVSVSGVVILTHAYFLLNDNITKDALDSLDNYHDLLRRPSIIFRLCNDLGTSRAELQRGEAASSIVCNMRESCVTEEGAYKNIHSLLDETWKKMNKDRAMHSPFSKPFVEAAINLARISHCTYLNGDGHGAPDIAAKNRIRSLIIEPIPLREINADIVQ 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00910 602 Gene3D Farnesyl Diphosphate Synthase 62 581 IPR008949 -
Gma12g00910 602 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 61 265 IPR008930 -
Gma12g00910 602 SFLD Terpene Cyclase Like 1 C Terminal Domain 267 592 IPR034741 -
Gma12g00910 602 CDD Terpene_cyclase_plant_C1 55 590 IPR044814 GO:0010333|GO:0016102
Gma12g00910 602 SFLD Isoprenoid Synthase Type I 267 592 - -
Gma12g00910 602 SUPERFAMILY Terpenoid synthases 267 591 IPR008949 -
Gma12g00910 602 Gene3D - 101 266 IPR036965 GO:0010333|GO:0016829
Gma12g00910 602 Pfam Terpene synthase, N-terminal domain 65 240 IPR001906 GO:0010333|GO:0016829
Gma12g00910 602 Pfam Terpene synthase family, metal binding domain 271 536 IPR005630 GO:0000287|GO:0010333|GO:0016829
Gma12g00910 602 Coils Coil 82 102 - -
Gma12g00910 602 PANTHER OS04G0344100 PROTEIN-RELATED 42 592 - -
Gma12g00910 602 PANTHER TERPENE SYNTHASE 12-RELATED 42 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00910 Gma-Chr12 9195176 9200798 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00910 K12742 K19968 gmx:100814880 1209.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00910 12 9195176 9200798 Gma12g00910 12 9195176 9200798 ECH
Gma13g02694 13 41631284 41636926 Gma12g00910 12 9195176 9200798 PCT