Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00897 ATGGTAATGCAAATTATGTATGAACAGATAGTGGACGAAGAAGCGAGGTTTGAAGCCGAAGTGGCGGAGGTGCAAGCATGGTGGAACTCTGAGAGGTTCAGGCTAACAAAAAGACCATACACAGCAAGAGATGTGGTGTCCCTCCGAGGCAACCTCAGACAAACCTATGCCTCGAACGAGATGGCGAAAAAGCTCTGGTGCCTTCTGAAGAACCACCAAGCCAACGGCACAGCCTCAAGGACTTTTGGTGCACTTGATCCTGTTCAGGTCACTCAAATGGCCAAGCACTTGGACACAATCTATGTCTCAGGGTGGCAGTGCTCAGCCACACACACCACGAGCAACGAGCCGGGCCCTGACCTTGCTGATTACCCTTATGATACTGTCCCAAACAAGGTTGAGCACCTCTTCTTTGCTCAGCAGTACCATGACAGGAAGCAAAGAGAGGAGAGGATGAGAATGAGCAGGGAAGAGAGGGCAAGGACCCCTTATGTTGATTACTTGAGGCCAATCATAGCTGATGGCGACACTGGTTTTGGTGGTACCACAGCAACTGTCAAGCTTTGCAAGCTATTTGTGGAGAGAGGTGCTGCCGGAATCCACATTGAGGACCAGTCTTCAGTGACCAAAAAGTGTGGCCACATGGCTGGAAAAGTGCTTGTTGCCATCAGTGAACACATCAATAGGCTTGTGGCTGCAAGACTTCAGTTTGATGTCATGGGGGTGGAAACTGTTTTGGTGGCAAGAACAGATGCAGAAGCTGCTAATTTGATTCAATCAAACATTGACACAAGGGACCATCAATTTATCTTGGGAGTGACCAACCCCAACCTTAAAGGGAAGAGTTTAGCAACTCTTATGCAACAAGGCATGGCTGCTGGGAAGAGTGGAGCTGAGCTTCAGGCTTTGGAGGATGAGTGGCTCTCAAAGGCACAGTTGAAGACTCTCTCAGAAGCAGTTGTGGAGGCAATTGAGAGGCAGAACATTGGAGAGGAAGAGAAGAGAAGGAAGCTGAATGAGTGGATGCACCATTCAAGCTATGAAAGGTGTCTTTCCAATGAGGAGGGTAGGGAGATAGCTGAAAAGTTAGGAGTAAGGAACCTCTTTTGGGATTGGGACTTGCCTAGGACTAGAGAAGGGTTCTACAGGTTCAAAGGGTCAGTGATTGCATCAGTTGTTAGAGGTTGGGCTTTTGCTCCACATGCTGATGTGATATGGATGGAAACTGCAAGCCCAAATGTGATTGAGTGCACACAGTTTTCTGAGGGGGTTAGGTCAAAGCACCCTCAGATGATGCTGGGGTACAACCTCTCTCCATCTTTCAACTGGGATGCTTCTGGCATGAGTGATGAACAAATGAGGGACTTCATTCCAAAGATTGCAAAGTTGGGGTATGTGTGGCAGTTCATCACAGTGGGAGGGCTGCATTCTAATGCACTCATTACTTCAACATTTGCAAGGGATTTTGCCAATAGGGGAATGCTAGCTTATGTGGAGAGGATTCAGAGAGAGGAGAGGAACAATGGGGTTGACACACTTGCTCACCAGAAATGGGCTGGTGCTAACTACTATGATAGGTATCTCAAGACTGTCCAGGGAGGTGTGGCTTCAACTGCTGCAATGGGAAAAGGCAAGTCATATATT 1644 0.4805 MVMQIMYEQIVDEEARFEAEVAEVQAWWNSERFRLTKRPYTARDVVSLRGNLRQTYASNEMAKKLWCLLKNHQANGTASRTFGALDPVQVTQMAKHLDTIYVSGWQCSATHTTSNEPGPDLADYPYDTVPNKVEHLFFAQQYHDRKQREERMRMSREERARTPYVDYLRPIIADGDTGFGGTTATVKLCKLFVERGAAGIHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAANLIQSNIDTRDHQFILGVTNPNLKGKSLATLMQQGMAAGKSGAELQALEDEWLSKAQLKTLSEAVVEAIERQNIGEEEKRRKLNEWMHHSSYERCLSNEEGREIAEKLGVRNLFWDWDLPRTREGFYRFKGSVIASVVRGWAFAPHADVIWMETASPNVIECTQFSEGVRSKHPQMMLGYNLSPSFNWDASGMSDEQMRDFIPKIAKLGYVWQFITVGGLHSNALITSTFARDFANRGMLAYVERIQREERNNGVDTLAHQKWAGANYYDRYLKTVQGGVASTAAMGKGKSYI 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00897 548 Gene3D - 16 534 IPR040442 -
Gma12g00897 548 PANTHER ISOCITRATE LYASE/MALATE SYNTHASE 12 545 IPR006254 GO:0004451|GO:0019752
Gma12g00897 548 Pfam Isocitrate lyase family 20 544 IPR006254 GO:0004451|GO:0019752
Gma12g00897 548 ProSitePatterns Isocitrate lyase signature. 210 215 IPR018523 GO:0003824
Gma12g00897 548 CDD ICL_PEPM 65 256 IPR039556 GO:0003824
Gma12g00897 548 PIRSF ICL 367 546 IPR006254 GO:0004451|GO:0019752
Gma12g00897 548 PIRSF ICL 11 299 IPR006254 GO:0004451|GO:0019752
Gma12g00897 548 TIGRFAM isocit_lyase: isocitrate lyase 21 544 IPR006254 GO:0004451|GO:0019752
Gma12g00897 548 Gene3D - 261 376 - -
Gma12g00897 548 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 10 534 IPR015813 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00897 Gma-Chr12 8948005 8949648 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00897 K01637 - gmx:100782793 1062.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00897 12 8948005 8949648 Gma12g00897 12 8948005 8949648 ECH
Gma12g00897 12 8948005 8949648 Gma06g02704 06 50707173 50711032 GST