Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00891 atgtcccattttggtcggaaactcagccgctcctccaccgtccggcgacggttccaccaccgcgtttccctgctccagcggtgcctcctccgcgtcctccaccgcatcctcctctgctccgggagcaaggccaccaatgccacgtatagcatgctgccgccggcattgccctctccgccgccgccggtgagctccgacggcgagctTGGCCGTGAAGAGATGGACCTTTCTTCGTCGGCGGTGTTTCAGACCCATGACTTGGACTCTGATTTGGTTTCCTTGAAGATCAGCTTGTTGGGGGATTGTCAAATTGGAAAAACCAGCTTTTTGGCGAAATATGTTGGGGATGAAAAAGAGCAGCAAGGGAACCAGAGGGAAGGGTTAAATCAGATGGACAAGACTTTGGTTGTTGAAGGAGCACGTATATCGTATTGTATCTGGGAAGTACAAGGTGATGGAAAATCAGAAGACCAACTCCCAATGGCTTGTATGGACTCCGTGGCAATTTTGATtatgtttgatctaacaagtcgatgcacattaaacagtgtcgtgggatggtacaaagaagccagaaaatggaatcagacggcaattccagtgttgattggaaccaagtttgatgatttcattcagctccctattgatttgcaatggaccatcgccaatgaggcaagaaaatatgcaaaggccctcaatgccaccttgttcttttcaagtgcaacctacaacatcaatgtgaataagatcttcaagttcatcactgctaaactctttgacctaccatggacagtggagaggaatctaactgttggggaacccatcattgacttctaa 837 0.1649 MSHFGRKLSRSSTVRRRFHHRVSLLQRCLLRVLHRILLCSGSKATNATYSMLPPALPSPPPPVSSDGELGREEMDLSSSAVFQTHDLDSDLVSLKISLLGDCQIGKTSFLAKYVGDEKEQQGNQREGLNQMDKTLVVEGARISYCIWEVQGDGKSEDQLPMACMDSVAILIMFDLTSRCTLNSVVGWYKEARKWNQTAIPVLIGTKFDDFIQLPIDLQWTIANEARKYAKALNATLFFSSATYNINVNKIFKFITAKLFDLPWTVERNLTVGEPIIDF 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00891 278 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 94 269 IPR027417 -
Gma12g00891 278 Gene3D - 85 268 IPR027417 -
Gma12g00891 278 SMART rab_sub_5 94 261 - -
Gma12g00891 278 ProSiteProfiles small GTPase Rab1 family profile. 88 278 - -
Gma12g00891 278 PANTHER MONOMERIC G-PROTEIN 39 277 - -
Gma12g00891 278 Pfam Ras family 95 258 IPR001806 GO:0003924|GO:0005525
Gma12g00891 278 PANTHER - 39 277 - -
Gma12g00891 278 MobiDBLite consensus disorder prediction 50 70 - -
Gma12g00891 278 PRINTS Transforming protein P21 ras signature 94 115 - -
Gma12g00891 278 PRINTS Transforming protein P21 ras signature 135 157 - -
Gma12g00891 278 PRINTS Transforming protein P21 ras signature 196 209 - -
Gma12g00891 278 PRINTS Transforming protein P21 ras signature 236 258 - -
Gma12g00891 278 SMART rho_sub_3 96 260 IPR001806 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00891 Gma-Chr12 8801540 8805180 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00891 K07976 - gmx:100780638 544.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00891 12 8801540 8805180 Gma12g00891 12 8801540 8805180 ECH
Gma12g00891 12 8801540 8805180 Gma06g02710 06 50839628 50843213 GST