Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00880 ATGACTTGGAAAAGCAGAGGAGAATTGCCTTCTAGAAGCGTTATCTCGCAGAGATGGGCACTGTTTCTCTGCTTAGGAAGTTTCTGTGCTGGAATGCTCTTCACTACAAGGATATGGACTATACCTGAAAACAACAAAGGACTAGCACGGCCAACAGCCTCAGAAGCTGAAAAATTGAGTTTAGTTTCAGAAGGCTGCAATTCCAGAATTTTGCAAGAGATGGAAATGAAGCACGATAAAGACACTTATGGTGAAGTTTTCAAGAGTCATAATTCCATACAAACATTGGACAAGGCTATTTCAAACTTAGAGATGGAATTGGCTGCTGCAAGGGCAACTCAGGAGTCTCTACGAAGTGGTGCTCCTATTTCAGATGATATAAGGTTGAGTGAATCTTCGGGTAAGAGAAAGTACCTTATGGTCATTGGTATTAACACTGCATTCAGTAGCAGGAAAAGAAGGGACTCGGTTCGATCTACTTGGATGCTACAAGGTGAGAAAAGAAAGAAGCTAGAGGAGAAGGGCATTATCATGCGCTTTGTAATTGGACACAGTGCTACATCAGGTGGTATTTTAGACAGAGCTATTGAAGCAGAGGACAGAAAGCATGGAGATTTCTTAAGGCTGAATCATGTGGAAGGATACCTTGAATTGTCAGCAAAGACAAAAACCTACTTTGCCACTGCTGTGAACTTATGGGATGCTGATTTCTATGTCAAAGTTGATGATGATGTTCATGTAAATATAGCAACACTGGGAGAAACTCTAGTTAGACATCGATCAAAACCACGGATATACATTGGATGCATGAAATCTGGGCCTGTCCTATCCCAAAAAGGGGTAAGGTACCATGAACCTGAGTACTGGAAATTTGGAGAGGCTGGAAACAGGTACTTCCGTCATGCCACAGGGCAGTTGTATGCCATTTCGAATGATTTGGCTACATACATATCAATTAACCAGAATGTTCTTCACAAGTATGCCAACGAGGATGTGTCACTAGGATCCTGGTTTATTGGACTTGATGTGGAGCATATAGATGATCGAAGACTTTGTTGTGGCACTCCTCCTGATTGTGAGTGGAAGGCACAAGCTGGAAACATTTGTGTTGCATCATTTGATTGGAGCTGCAGTGGAATTTGCAGGTCTGCTGAGAGGATTAAAGAGGTACATAGGAGGTGTGGAGAGGGTGAGAATGTTTTGTGGAGTGCCTCTTTCTAG 1221 0.4251 MTWKSRGELPSRSVISQRWALFLCLGSFCAGMLFTTRIWTIPENNKGLARPTASEAEKLSLVSEGCNSRILQEMEMKHDKDTYGEVFKSHNSIQTLDKAISNLEMELAAARATQESLRSGAPISDDIRLSESSGKRKYLMVIGINTAFSSRKRRDSVRSTWMLQGEKRKKLEEKGIIMRFVIGHSATSGGILDRAIEAEDRKHGDFLRLNHVEGYLELSAKTKTYFATAVNLWDADFYVKVDDDVHVNIATLGETLVRHRSKPRIYIGCMKSGPVLSQKGVRYHEPEYWKFGEAGNRYFRHATGQLYAISNDLATYISINQNVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWSCSGICRSAERIKEVHRRCGEGENVLWSASF 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00880 406 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE 4-RELATED 7 398 - -
Gma12g00880 406 Coils Coil 93 113 - -
Gma12g00880 406 Pfam Domain of unknown function (DUF4094) 16 112 IPR025298 -
Gma12g00880 406 Pfam Galactosyltransferase 152 348 IPR002659 GO:0006486|GO:0016020|GO:0016758
Gma12g00880 406 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 7 398 IPR002659 GO:0006486|GO:0016020|GO:0016758
Gma12g00880 406 Gene3D - 135 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00880 Gma-Chr12 8627695 8632705 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00880 1 406 Glycosyltransferase AT1G05170 77.206 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00880 K20855 - gmx:100776912 830.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00880 12 8627695 8632705 Gma12g00880 12 8627695 8632705 ECH