Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00853 ATGGAGTTTCAGTCTCTTTCCAGATTCTACCTTCTTCTTTCCTTAACCATTCTCTTCCTTGCACCCTTTCACGCTcaagctaaaattaaagtcacttactgcgATAAGAAGGCAGACTATCCTGTGAAGGTGTCTGGAGTTGAAATATCACCAGACCCTGTGGAGAGTGGCAAGCCTGCTACCTTTAAGATCTCGGCTACTTCTAGTAAAGCTATTTATGGTGGAGAAGTTGTAATTGGAGTTTCATACGTTGGGGTGCCTGTCCATACTGAAAGAATTGATCTCTGTCATGAAGTATCCTGTCCTGTTGCCAATGGCAATTTTCTGATTTCTCACACCCAAACATTGCCTTCGATTACTCCACCGGGACCCTACTCTCTGAAGATGACACTGAAGAATGATCGGGACGAGAATATCAGAACACAACATTTCAATTCCTCTCTCGATTTGTTTTGCAAGTTCGATAATCGAAAGTGCCTGGTGATTCGATGTTGTGTTTACATAGGAGTTATGCATCATATGGCTGGTCAAAGGGGGGAGGCCAAGTCGGGTAATTTTGAAGGACGGCTAGAGGCCTTTACTCCACAGAGAGAGAATCCGTATGCAAATTCCAAGCAGGAGGGTCAGGGTCAGTGGAGATGGGAAATTGATGAAGCAAAGATGTCCAATTCAATGGCATCTCGAATGTTTAATGAAGGTCAGGGGGTTGATGCTTCAAAGTCCTATTTTCAAGGGCCGAGCCGGAACAACAGTGATTCCAGATCTCAGGCTCATGGAGAAGATATGGATGTTGGGTATGAAGGAAATCATTTATCACAATCTTTTGAAGGTCTTGAGCAGAATTTTCATGATGACATTATTAAACTCACCAAAGAACAGAATGACGCTGAAGATGCAGAATATGCCAGACACAGAGAGAAAATAAATGCAATCAATGCTCAGTATGAGGAAAAACTGGCAGCACTCCGAGCTCAGCATAGCAGCCGCAGAGCTGAATTTCTTCAAAGGGAATCACATGCTAGGCAACAGCAGTACCAGCAAATCATAAGGGATCCTTACCCCAGTGGTGGCATGGCACCCGGAGACCCTCATGGTTACAACAATGTGAATGCTTCAGGTACAGGTGAAGTGCAACGAGGCTATTCTGCCGATCACCTTGATCCTTACCGAGAGAGAGCTCGATTTCTTGGGGGTGGTAGAGATCAAGGATTTGAACCTAGAGGTCCATATCCTGGTGGCCGTGTCTATGACACTGGTTCACGCTATTACAATTGA 1275 0.4392 MEFQSLSRFYLLLSLTILFLAPFHAQAKIKVTYCDKKADYPVKVSGVEISPDPVESGKPATFKISATSSKAIYGGEVVIGVSYVGVPVHTERIDLCHEVSCPVANGNFLISHTQTLPSITPPGPYSLKMTLKNDRDENIRTQHFNSSLDLFCKFDNRKCLVIRCCVYIGVMHHMAGQRGEAKSGNFEGRLEAFTPQRENPYANSKQEGQGQWRWEIDEAKMSNSMASRMFNEGQGVDASKSYFQGPSRNNSDSRSQAHGEDMDVGYEGNHLSQSFEGLEQNFHDDIIKLTKEQNDAEDAEYARHREKINAINAQYEEKLAALRAQHSSRRAEFLQRESHARQQQYQQIIRDPYPSGGMAPGDPHGYNNVNASGTGEVQRGYSADHLDPYRERARFLGGGRDQGFEPRGPYPGGRVYDTGSRYYN 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00853 424 PANTHER - 169 423 - -
Gma12g00853 424 Coils Coil 287 332 - -
Gma12g00853 424 MobiDBLite consensus disorder prediction 237 253 - -
Gma12g00853 424 MobiDBLite consensus disorder prediction 395 424 - -
Gma12g00853 424 Gene3D - 27 148 - -
Gma12g00853 424 PANTHER OS01G0252900 PROTEIN 169 423 - -
Gma12g00853 424 MobiDBLite consensus disorder prediction 193 212 - -
Gma12g00853 424 MobiDBLite consensus disorder prediction 237 262 - -
Gma12g00853 424 CDD PG-PI_TP 31 139 IPR033917 GO:0032366
Gma12g00853 424 Pfam ML domain 29 139 IPR003172 -
Gma12g00853 424 SMART pgtp_13 31 156 IPR003172 -
Gma12g00853 424 SUPERFAMILY E set domains 29 137 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00853 Gma-Chr12 8174032 8187226 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00853 - - gmx:100789541 532.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00853 12 8174032 8187226 Gma12g00853 12 8174032 8187226 ECH
Gma12g00853 12 8174032 8187226 Gma11g01423 11 14660395 14665586 GST