Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00850 ATGGGGAAGAAGCAGAACGAGATCCAGAAAACGGGGCTAGGTCGAGCCCTGGTGAAGCAGCACAACCAGATGATCCAACAGAGCAAGGACAAGTCTCGCTTCTACAGGAAGAAGTTCCTTGAATCCTTCACCGAAGTCTCCGACATCGACGCCGTCGTCGAGCAATCCCTAGAACCCCTCCCCGAACTTGCCGCTGCCGCTTCAACCACTCTCATCAGCCTTGAACCAGGTTCCGTGCCCGATGAAACGACGACGCCGGAAGAAGCGAGGAAGCAGCAGAAGCAAGAGGAGGCGCTCCACGCCAGCAGCCTCCGCGTTCCTCGCCGCCCGCCGTGGACTCCCGACATGTCCGCCGACGAGCTGAACGCCAGCGAAACCCAAGCTTTCTTGACCTGGCGCCGCAGCTTGGCGAGGCTTGAGGAGAATAAGAAGCTTGTTCTTACTCCGTTTGAGAAGAATCTTGACATCTGGAGACAGCTCTGGCGGGTTGTTGAGCGCAGTGATCTGCTTGTTATGGTCGTTGATTCGCGAGATCCGCTGTTCTATCGTTGTCCAGATCTTGAGGCTTATGCACGGGAGGTTGATGAGCATAAACGCACATTGCTTTTGGTTAATAAGGCAGATCTTTTACCTGCTTCTATCAGAGAGAAATGGGCCGAATATTTTCGTGCTCATGATATTCTCTTCATCTTCTGGTCGGCTAAAGCTGCTACTGCTGCCTTGGAAGGCAAAAAACTTGGTTCATCATGGGAGGATGATAACATGGGGAGAACTAATAGCCCAGACACAAAGATATATGGAAGGGATGAACTTTTGGCCCGCTTGCAATCTGAGGCAGAAGAGATAGTTGACAGAAGGAGAAATTCTGGCTCCTCTGAGGCAGGACCATCTAACATTAAATCCCCTGCTGAAAATACTGCTGGTAGTTCATCATCGAGCAATGTTGTTGTGGGATTTGTTGGATATCCTAACGTGGGGAAAAGTTCAACTATTAATGCTCTGGTTGGTCAAAAACGCACTGGTGTCACCTCTACCCCAGGGAAAACAAAGCACTTTCAGACATTAATTATCTCTGATGAGCTGACCCTTTGTGATTGTCCTGGATTAGTTTTTCCATCCTTCTCAAGCTCAAGATATGAGATGATTGCTTGTGGGGTGTTACCTATTGATAGGATGACTGAACAAAGGGAATCTGTCCAAGTTGTTGCTGATAGAGTCCCGAGACATGTCATTGAGGAGATTTATAAGATAAGGCTTCCTAAACCTAAGTCATATGAGTCCCAATCGCGCCCCCCTCTAGCATCTGAACTTTTGAGAGCATACTGTACTTCTCGTGGGTATGTTGCCTCTAGTGGACTCCCTGATGAAACCAGGGCTGCCCGTCAGATGTTGAAAGATTACATTGATGGGAAGCTGCCTCACTATCAAATGCCTCCCGGAGCGTCAGATGAGGAACAAGCTTTGGAAGAACCTGCTGGACATGACTCGGTTGACTTGGATGCATCAGATTCATCTGCTATTGAAGATTCTTCAGATGTTGAGAGCGAACTTGCACCAAATCTTGAACATGTATTGGTTGACCTCAATTCATTTGACATGGCTAATGGACTTGCTCCAAAAAATACTACTACTGTTAAGAAGCCTAAGGCATCTCATAAGCACCACCATAAAAAGCCACAGAGGAAAAAAGATCGTTCTTGGAGAGCAGGAAAAGCAGGAAACGAGGATGCTGATGGGATGCCAGTTGCAAGATTCTTTCAGAAACCAGCAAATACAGGTCCTCTGAAGGTTGGGTAA 1797 0.4802 MGKKQNEIQKTGLGRALVKQHNQMIQQSKDKSRFYRKKFLESFTEVSDIDAVVEQSLEPLPELAAAASTTLISLEPGSVPDETTTPEEARKQQKQEEALHASSLRVPRRPPWTPDMSADELNASETQAFLTWRRSLARLEENKKLVLTPFEKNLDIWRQLWRVVERSDLLVMVVDSRDPLFYRCPDLEAYAREVDEHKRTLLLVNKADLLPASIREKWAEYFRAHDILFIFWSAKAATAALEGKKLGSSWEDDNMGRTNSPDTKIYGRDELLARLQSEAEEIVDRRRNSGSSEAGPSNIKSPAENTAGSSSSSNVVVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIISDELTLCDCPGLVFPSFSSSRYEMIACGVLPIDRMTEQRESVQVVADRVPRHVIEEIYKIRLPKPKSYESQSRPPLASELLRAYCTSRGYVASSGLPDETRAARQMLKDYIDGKLPHYQMPPGASDEEQALEEPAGHDSVDLDASDSSAIEDSSDVESELAPNLEHVLVDLNSFDMANGLAPKNTTTVKKPKASHKHHHKKPQRKKDRSWRAGKAGNEDADGMPVARFFQKPANTGPLKVG 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00850 598 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 447 IPR027417 -
Gma12g00850 598 Pfam 50S ribosome-binding GTPase 317 373 IPR006073 GO:0005525
Gma12g00850 598 Gene3D - 156 373 IPR027417 -
Gma12g00850 598 MobiDBLite consensus disorder prediction 281 307 - -
Gma12g00850 598 Gene3D - 375 478 IPR023179 -
Gma12g00850 598 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 157 372 IPR030378 GO:0005525
Gma12g00850 598 MobiDBLite consensus disorder prediction 546 565 - -
Gma12g00850 598 MobiDBLite consensus disorder prediction 542 598 - -
Gma12g00850 598 MobiDBLite consensus disorder prediction 75 103 - -
Gma12g00850 598 PANTHER LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED 9 562 IPR043358 GO:0003924
Gma12g00850 598 MobiDBLite consensus disorder prediction 84 103 - -
Gma12g00850 598 MobiDBLite consensus disorder prediction 481 515 - -
Gma12g00850 598 MobiDBLite consensus disorder prediction 290 307 - -
Gma12g00850 598 PANTHER GTPASE LSG1-1 9 562 - -
Gma12g00850 598 PRINTS GTP1/OBG GTP-binding protein family signature 317 337 IPR006073 GO:0005525
Gma12g00850 598 PRINTS GTP1/OBG GTP-binding protein family signature 363 378 IPR006073 GO:0005525
Gma12g00850 598 CDD HSR1_MMR1 156 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00850 Gma-Chr12 8143636 8147790 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00850 K14539 - gmx:100817523 1116.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00850 12 8143636 8147790 Gma12g00850 12 8143636 8147790 ECH
Gma12g00850 12 8143636 8147790 Gma11g01438 11 14883838 14887621 GST