LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma12g00848	ATGTCATCAGCACCTATGACCGACAACAACAAGGTTCAAAACAAAGGCCTTTTATCTTCTTCTTCTTCTTCTTCTGTGAGGATAGAGGAAGAGATCATGAAGCAGGGCATCATAACCATTTTGAACTCAAACACAAACACACcttcttcttcttcttcttcttcttcttctCTGCGAAGAACTCTCTCCGCAGACATGTCCTCAAAGAACTACTTGCATGCAAAAACCATTGCTGACTCAGAAAAAGAAGAAGAAGATGATGAAGATGAAGCTGAGAGAGAGAGGCTGGAGATTTGGAGCTCCATCCAACGGAACAAGAAGGAGGAGCAAGAGAAATCAGGAGCCTTTGATATTTGGAGCTCAATCGTATCTCTCAAGGGCAAAGATGAAATCTCCAAATCAATGCCTATTACACCTTATGTTCACCCTCTTGTCAAAAGGTCCAAGAGTTGTTTGAGTGGCAAGAGCCTCGAAATCTGCACTGAGAGTCTCGGCTCCGAGACTGGCTCTGATGCCCTGTTGTTATCTTCTCACTCTTCTTCTTCTGAGACAGGGGATGCAACAGAGCAAGAACAAGACAAAGAACAAGTTAACGAAGAAGAAGAAGAAGAGTTATGCAATTATGCTTCAGTGGTGGCTACAAAGAAggcttcggcttcggcttcggcttcggcttcACCACCACGCGCTTTCCCTCCACCACTTCCTTCACTCTCTCATCACCAAGCAAGTTCTTCAGTAACTCACATGCGTTCCCACCGCGACAATGGAAGGTTGGTTCTCCAAGCTGTTTCTGTTCCTTCTCACAACAATTTCAGCATTCAGCGCCAAGATGGTCGCCTTGTCCTCACTTTCTCCAATCACCAAgaggaggaggaggaggaggaggaggaAGAAGAAGAGAATGGTGATCATGTGGAGGAGTTGGGAGAAGAGTGCTTTGGAGGGTTTGAGTTTGGAGAAGAGGAGGATTATTATGACGAGGGTGAAGATGAAGAGGAAGAGGAATACTTTCTTGGCACGAAGCCACAGGTATCCTCTATTGAACCCAATTCTGTTCTGATGGGGTACGAGAGTGTGATAGAGAAAGCGCCGCTATTGCCTAGTGGGGTGACAAGTAGTGTTCATGAGTTGGCTTTGATGATGAATATTAAGAATAAGCCAATTGGGGTAGTGAATAGGAATCCAAAGTGGTCGGAGAAGTTCAATGAGATGACCAATTTTGATGATGTTAATGTGGCAGCACAATCACTGCCTCCAAGGCCAAGGGTGGCAAGGTTGATTCCATCAGCACCAGCTGCTTCTTTCAATTTCAATGCTTATGAATACTATTGGAGGACCAAGTCTGCATCATCAAAAGGTACTAGTGTTAACCTTAACCAACTTGACCAAGAGAAACTGAAGAGCAAGGTTGTTGTGTCCGGGGACATGAACAAGGTGGTCTCAAGGGAGCAACAGCAGTTGCTGGTTCTTAGAGGGAAGAATGGTGATTACTTGGTTCACAATTTGAAGAGTTGCAAGGATTCTAGAAGGTCGTTTCTGTTCTGGGAACCCTATTGCATTGCCACCTCCTGA	1575	0.4235	MSSAPMTDNNKVQNKGLLSSSSSSSVRIEEEIMKQGIITILNSNTNTPSSSSSSSSSLRRTLSADMSSKNYLHAKTIADSEKEEEDDEDEAERERLEIWSSIQRNKKEEQEKSGAFDIWSSIVSLKGKDEISKSMPITPYVHPLVKRSKSCLSGKSLEICTESLGSETGSDALLLSSHSSSSETGDATEQEQDKEQVNEEEEEELCNYASVVATKKASASASASASPPRAFPPPLPSLSHHQASSSVTHMRSHRDNGRLVLQAVSVPSHNNFSIQRQDGRLVLTFSNHQEEEEEEEEEEEENGDHVEELGEECFGGFEFGEEEDYYDEGEDEEEEEYFLGTKPQVSSIEPNSVLMGYESVIEKAPLLPSGVTSSVHELALMMNIKNKPIGVVNRNPKWSEKFNEMTNFDDVNVAAQSLPPRPRVARLIPSAPAASFNFNAYEYYWRTKSASSKGTSVNLNQLDQEKLKSKVVVSGDMNKVVSREQQQLLVLRGKNGDYLVHNLKSCKDSRRSFLFWEPYCIATS	524

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma12g00848	524	Coils	Coil	288	309	-	-
	Gma12g00848	524	Coils	Coil	77	97	-	-
	Gma12g00848	524	MobiDBLite	consensus disorder prediction	172	205	-	-
	Gma12g00848	524	MobiDBLite	consensus disorder prediction	287	306	-	-
	Gma12g00848	524	MobiDBLite	consensus disorder prediction	172	186	-	-
	Gma12g00848	524	MobiDBLite	consensus disorder prediction	220	252	-	-
	Gma12g00848	524	Coils	Coil	187	207	-	-
	Gma12g00848	524	MobiDBLite	consensus disorder prediction	289	306	-	-
	Gma12g00848	524	MobiDBLite	consensus disorder prediction	1	26	-	-
	Gma12g00848	524	PANTHER	FANTASTIC FOUR-LIKE PROTEIN (DUF3049)	30	523	IPR021410	-
	Gma12g00848	524	Pfam	Fantastic Four meristem regulator	230	285	IPR046431	-
	Gma12g00848	524	PANTHER	PROTEIN FAF-LIKE, CHLOROPLASTIC	30	523	-	-
	Gma12g00848	524	MobiDBLite	consensus disorder prediction	41	94	-	-
	Gma12g00848	524	MobiDBLite	consensus disorder prediction	41	74	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma12g00848	Gma-Chr12	8115242	8117473	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma12g00848	-		-	gmx:100787948	795.808

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma12g00848	12	8115242	8117473	Gma12g00848	12	8115242	8117473	ECH
	Gma12g00848	12	8115242	8117473	Gma11g01448	11	15008403	15010744	GST
	Gma13g02768	13	42256415	42257632	Gma12g00848	12	8115242	8117473	PCT
	Gma12g01789	12	38505994	38507341	Gma12g00848	12	8115242	8117473	PCT
	Gma12g00848	12	8115242	8117473	Gma13g02768	13	42256415	42257632	PCT
	Gma12g00848	12	8115242	8117473	Gma12g01789	12	38505994	38507341	PCT