Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00839 ATGGCGGAGAAGAAAGTGGTCATCCTAGGAGGTGGTGTTGCCGGAGCCAACCTTGCAAAAACTATACAACATCAAGCCAACGTCACCCTTATTGATCCGAAAGAATATTTTGAGATTCCATGGGCAAGTTTGAGGGGATTGGTTGAGCCAACTTTTGCTGAAAGGATAGTGATCAACCATAGAGAGTACTTCAAAAAGGGTGACCTTGTTGTATCCAGTGCTGTCAACATAACTGAAACCGCAGTGGTGACTGCAGATGGCCAGCAGATAGCCTATGACTATCTTGTTATTGCCACTGGACACACAGAACCTATCCCCAAAACCAGGAGAGAAAGACTTGACCAATACAAAGGAGAAAATGCAAAGATCAAATCTGCAAGTTCAGTTTTGATTGTTGGGGGAGGTCCAACTGGTGTTGAGCTTGCAGCAGAGATTGCTGTTGATTTTCCTGATAAGAAGGTCACCATAGTGCATAAAGGAACAAGGTTGCTTGAATACATTGGGACAAAAGCTTCAAGTAAGGCTTTAAAGTGGCTCAAATCAAAGAAAGTTGATGTGAAACTAGAGCAATCAGTAGACTTGAGCTCCTCCTCGGAAGCAAGTAAGACATATCAAACTTCAAATGGAGAGACTATAGAAGCAGATCTTCATTTTCTATGCATAGGGAAACCACTTGGCTCAACATGGATTAGGGAAACTCTTCTAAACAATGACTTGGATGCTGATGGAAGGATCAAGGTCGATAAACACTTGAGAGTGAAGGGCAAGAGCAATATTTTTGCAATTGGAGATATTACAGATGTTCAAGAAATCAAACAAGGGATGTATGCAAGTGCTCATGCTCAAGTGGTTGCTAAGAACCTGAAGCTATTGATAGAGGGAGGAGGCAAAGAGCATAAGTTGGGAACATACAAGGCACAACCACCAATATCTATGGTTTCACTAGGAAGGAAAATAGCGGTTGCACAGTTCCCATTCATGACTGTGCTTGGAAGGCTTCCTGGCATGATCAAGTCAGGAGATTTGTTTGTAGGGAAAACCAGAAAGGAATTAGGAGTCGAACCTAATGTTAAAAAATCTTAA 1083 0.4211 MAEKKVVILGGGVAGANLAKTIQHQANVTLIDPKEYFEIPWASLRGLVEPTFAERIVINHREYFKKGDLVVSSAVNITETAVVTADGQQIAYDYLVIATGHTEPIPKTRRERLDQYKGENAKIKSASSVLIVGGGPTGVELAAEIAVDFPDKKVTIVHKGTRLLEYIGTKASSKALKWLKSKKVDVKLEQSVDLSSSSEASKTYQTSNGETIEADLHFLCIGKPLGSTWIRETLLNNDLDADGRIKVDKHLRVKGKSNIFAIGDITDVQEIKQGMYASAHAQVVAKNLKLLIEGGGKEHKLGTYKAQPPISMVSLGRKIAVAQFPFMTVLGRLPGMIKSGDLFVGKTRKELGVEPNVKKS 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00839 360 PANTHER NADH:UBIQUINONE REDUCTASE (NON-ELECTROGENIC)-RELATED 1 360 - -
Gma12g00839 360 PANTHER APOPTOSIS-INDUCING FACTOR 1 1 360 - -
Gma12g00839 360 SUPERFAMILY FAD/NAD(P)-binding domain 1 288 IPR036188 -
Gma12g00839 360 PRINTS FAD-dependent pyridine nucleotide reductase signature 6 25 - -
Gma12g00839 360 PRINTS FAD-dependent pyridine nucleotide reductase signature 128 146 - -
Gma12g00839 360 PRINTS FAD-dependent pyridine nucleotide reductase signature 244 266 - -
Gma12g00839 360 Pfam Pyridine nucleotide-disulphide oxidoreductase 4 279 IPR023753 GO:0016491
Gma12g00839 360 Gene3D - 1 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00839 Gma-Chr12 7849138 7852444 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00839 6 272 EF-hand Containing Proteins AT4G28220 23.547 1.63e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00839 K22745 - gmx:100813980 694.501