Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00838 ATGGAAATAGACGGGAATAGAGTGGTAATCCTAGGAGGTGGCGTTGCGGGATCCGTCGTCGCTAAATCTCTTCAATTCCATGCCCATGTCACACTCGTTGATCCGAAGGAATATTTTGAGATTACATGGGCGAGTTTGAGGTCAATGGTTGAGCCATCTTTTGCAGAGAGGTCAGTGATCAATCACAGAGATTACTTTACCAATGGCGACATCGTTACGTCCAATGCCGTCAATGTTACAGAAACAGAAGTGTTGACTGCAGATGGCCATCGAATTGGCTATGACTATCTTGTTATTGCCACTGGCCATGCAGATCCTCTCCCCAAAAGTAGGAGGGAAAGACTTAATCAGTTCAAAGAAGACAATCAAAAGATAAAATCTGCTCAATCCATTCTGATTATTGGAGGAGGTCCCACTGGTGTGGAACTTGCTGGAGAGATAGCTGTTGATTTTCCAGATAAGAAACTTACACTAGTGCACAAAGGAGCGAGGCTGCTGGAATTCATAGGGGCAAAAGCTGGGGATAAGACTCTAAATTGGTTGAAATCAAAGAATGTTGTGGTGAAACTAGAGCAATCAGTTGACTTGAATGCATTCAAAGATGGACAGAAGATATATCAAACTTCCAACGGAGAGACCATTGAAGCAGATTGTCATTTCTTATGTATAGGGAAACCACTTGCTTCAGCATGGCTTAAGGAAACTGTGTTGAAGAATGACTTGGATGGTCAAGGAAGGATCAAGGTAGATGAAAAATTAAGAGTCAAGGGCAAGGACAACATTTTTGCAATTGGAGATATTACAGATATTCCAGAAATCAAGCAAGGTTTTTTGGCACAGCAGCAGGCTGAAGTGGTTGTGAAGAACTTGAAGGTGATATTAGAGGGAGGAAGAGAATGTAGGATGGAAACTTACAAGCCACATTCAGCAATAGCAATAGTTTCACTTGGGAGGAAAGATGCTGTGGCACAGTTACCATTCTTGACAATCGGTGGAAGAATTCCTGGATTCATCAAGTCTGGAGATTTGTTTGTTGGTAAAACAAGAAAACAAATGGGACTCAATCCAGATATTGTACAAGCTTGA 1086 0.419 MEIDGNRVVILGGGVAGSVVAKSLQFHAHVTLVDPKEYFEITWASLRSMVEPSFAERSVINHRDYFTNGDIVTSNAVNVTETEVLTADGHRIGYDYLVIATGHADPLPKSRRERLNQFKEDNQKIKSAQSILIIGGGPTGVELAGEIAVDFPDKKLTLVHKGARLLEFIGAKAGDKTLNWLKSKNVVVKLEQSVDLNAFKDGQKIYQTSNGETIEADCHFLCIGKPLASAWLKETVLKNDLDGQGRIKVDEKLRVKGKDNIFAIGDITDIPEIKQGFLAQQQAEVVVKNLKVILEGGRECRMETYKPHSAIAIVSLGRKDAVAQLPFLTIGGRIPGFIKSGDLFVGKTRKQMGLNPDIVQA 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00838 361 PANTHER APOPTOSIS-INDUCING FACTOR 1 6 358 - -
Gma12g00838 361 Gene3D - 4 348 - -
Gma12g00838 361 SUPERFAMILY FAD/NAD(P)-binding domain 6 279 IPR036188 -
Gma12g00838 361 PRINTS FAD-dependent pyridine nucleotide reductase signature 8 27 - -
Gma12g00838 361 PRINTS FAD-dependent pyridine nucleotide reductase signature 130 148 - -
Gma12g00838 361 PRINTS FAD-dependent pyridine nucleotide reductase signature 246 268 - -
Gma12g00838 361 Pfam Pyridine nucleotide-disulphide oxidoreductase 7 274 IPR023753 GO:0016491
Gma12g00838 361 PANTHER NADH:UBIQUINONE REDUCTASE (NON-ELECTROGENIC)-RELATED 6 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00838 Gma-Chr12 7839655 7846310 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00838 8 274 EF-hand Containing Proteins AT4G28220 23.099 4.83e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00838 K22745 - gmx:100813439 705.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00838 12 7839655 7846310 Gma12g00838 12 7839655 7846310 ECH
Gma12g00838 12 7839655 7846310 Gma11g01459 11 15322699 15326399 GST