Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00833 ATGCACATCCATGCTCGCAAACAACCACACACAACGACCTTCAAGCATCCACAAACATACACGAACAACAAAGATCGTGAACTAATATTCCACAGCCATGACATGAGACACTTCAGTAAAGGGAAGAGGAGAAAAAGACAAGCCACATACAgtttatgggttttctcctcacttatatggtgctcaacttttccacttttacccgatgtgggactttacctcacacttgtacACACTTGTACTCAACAGATAGAAGATCCTCCTAAGAATTGCAGCGTTGAGTTTGAGAGGATAATTGATGATTTCATCTTCATTTGCTTTTTCGCTGGAAATGATTTTCTGCCCCACATGCCAACTTTGGAAATTCACGAGGGGGCTATTGATTTGCTAATGAATGTTTACAAGAAAGAATTCAATAAACTTGGAGGATATCTTGTGGACATGAGCAGGATTGGGGAGGAACATGCTGCTTTTTTGAAGTTATCTAGAGTTGAAAAATTTATACTTGCTGTTGGTGCATATGAAGAGAAAATCTTTAAGAAAAGATCCGAAACACGAGAAAGATATCTGCGAAGGCTTATTAGAGATAATGAGGATGCTAAGCGGGAAGAAGTGAATGCAGCATGTTACTCCGATCTTGATGATGAAAATACTTCTGATTGTACTCTTCTGATTAAGAAGGCACCAGATTCAAAAACTTTGTCTGTTTTGGTCAACAATGTCTCAGCTACACATGCTGAAATTGAGCAGAACACAAAGGATTTAAAAAATGAATTGAAGAGATGTATTAGAGAGAAATGTGACTTGTTTAAGAGCGGGGATTTCCTAATAGACAAGATAAAATTGGGAACACCTGGTTTCAAAGAAAGATATTTTAAAGCAAAGTTTTCTGTAGAGGGACCTACTGACATTGAGTGCAAAAGAAAAGAAATAGTCCAGAAGTACACGGAAGGTTTGGTGTGGGTTCTCCAATACTATTTTTCATCAGTTGCTTCGTGGACATGGTTTTATCCATTTCACTATGGTCCATTTGCTTCGGACTTAAAGGGCATGGGTCAGGTGAGAGTAAAATTTGAAAAAGGTGTCCCATTTTTACCACTTGATCAACTTTTAAGTGTTCTTCCCCCGGCAAGTTCTCATGCACTTCCAAAAGCCTATTCGCAATTGATGCTAGATGAGCAGTCTAGAATATTTGACTTTTATCCTCAAGATTTTGAAGTTGACACGGAAGGAAAGCGCTTCATGTGGCAGGGAATCTGCATACTTTCATGGATTGATGATAAACGGCTTGTGGCTGAAACCAGAGAACTCAAAAATGAATTATCTGAAAATGAGGCCATAAGAAATTCAGTCAAAGCTGATAGCTTGTTAGTTAGAAGCGCTAGCAAATTAGCAGAGAAATTTGGCTCTCTTTCTCTAGACACAAACCTGCCTTGCAAATTAGAAACAAGAATGAGCAGTGACGGCATTGGGGGTATCCTAAGTCTTTGTGACGAGTTCGTTGAGAAGCCTTGCTTGGACATTAGTGACAACAAAAAAGAAGATAGTGTCTTATGTGTCTATTACGAGCTTCCTGCTGGTAGTAATCATATTCCTGGTTTACTATCGGATGTGAAGCTTCCAGAGAAGACAATCTTTGAAAGTGACATTATGGAAACAGAACTCTGGCATGAACGTCAGAAATATTATAGTCGTTTTGAGAGGGTGCAAAATCAAGACAATTGGAGGAGTGAAAACACAAGCAATACTTCAAGGTTTGCCTCAAATGCAATTAGCCAACATACAAGAATCTTTTCATCAAACACACCTTTATTCACTTTCCAAGGTGCTGGTGTCGGATGGGGTTCGGGTAGAGGGAAAAGAATTGATGCAATGGCAAGTGAGAGTGTGCCAAACAACACAAAACCACAGCACTTTGTGGACAACTTTAGACAACTCAGAATATCAGAGTCTAATAATCATTTTCTGAGGCCTGGTGGTGGCAGTTCTCTGTTTCGACCACATAACAAGGGTCacatgaatcagtcaagaaatgctccttatcatcaaggctcaccatctaataatggttacattaatcagccaagaaatgctccttatcatcaaggctcacagtataataatggttacatgaatcagtccaaaactgctcctaatcatcaagggtcacaATATGTGACTGTGCCTAATTTTGGTCGAGGACAAGGTAGGGGTGCATCTAGTAACAGTTCATTGCGGCCTCAATGGAGTGGTGGAAAAGCTTATCAAGTGAAAGATCAAGATCGTTGGTAA 2292 0.356 MHIHARKQPHTTTFKHPQTYTNNKDRELIFHSHDMRHFSKGKRRKRQATYSLWVFSSLIWCSTFPLLPDVGLYLTLVHTCTQQIEDPPKNCSVEFERIIDDFIFICFFAGNDFLPHMPTLEIHEGAIDLLMNVYKKEFNKLGGYLVDMSRIGEEHAAFLKLSRVEKFILAVGAYEEKIFKKRSETRERYLRRLIRDNEDAKREEVNAACYSDLDDENTSDCTLLIKKAPDSKTLSVLVNNVSATHAEIEQNTKDLKNELKRCIREKCDLFKSGDFLIDKIKLGTPGFKERYFKAKFSVEGPTDIECKRKEIVQKYTEGLVWVLQYYFSSVASWTWFYPFHYGPFASDLKGMGQVRVKFEKGVPFLPLDQLLSVLPPASSHALPKAYSQLMLDEQSRIFDFYPQDFEVDTEGKRFMWQGICILSWIDDKRLVAETRELKNELSENEAIRNSVKADSLLVRSASKLAEKFGSLSLDTNLPCKLETRMSSDGIGGILSLCDEFVEKPCLDISDNKKEDSVLCVYYELPAGSNHIPGLLSDVKLPEKTIFESDIMETELWHERQKYYSRFERVQNQDNWRSENTSNTSRFASNAISQHTRIFSSNTPLFTFQGAGVGWGSGRGKRIDAMASESVPNNTKPQHFVDNFRQLRISESNNHFLRPGGGSSLFRPHNKGHMNQSRNAPYHQGSPSNNGYINQPRNAPYHQGSQYNNGYMNQSKTAPNHQGSQYVTVPNFGRGQGRGASSNSSLRPQWSGGKAYQVKDQDRW 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00833 763 Gene3D - 355 451 - -
Gma12g00833 763 PANTHER 5'->3' EXORIBONUCLEASE 83 585 IPR027073 -
Gma12g00833 763 MobiDBLite consensus disorder prediction 668 750 - -
Gma12g00833 763 Pfam Xrn1 helical domain 93 550 IPR041412 -
Gma12g00833 763 MobiDBLite consensus disorder prediction 652 763 - -
Gma12g00833 763 Coils Coil 238 265 - -
Gma12g00833 763 PANTHER OS11G0157000 PROTEIN 83 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00833 Gma-Chr12 7780098 7787189 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00833 - - gmx:100783700 1417.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00833 12 7780098 7787189 Gma12g00833 12 7780098 7787189 ECH