Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00826 ATGGCAACTGTTTCTGCGGTCTCAGCTCCTATTAGAAGGCTTGAGGGGAAAGTGGCGATTATCACTGGTGGTGCAAGCGGCATAGGTGAGGCCACTGCAAGACTCTTCTCTAAGCACGGAGCACACGTTGTCATAGCTGATATTCAAGACGATTTGGGCCTCTCTCTTTGCAAACACTTGGAATCCGCTTCCTATGTTCACTGCGACGTGACAAAGGAAGAGGACGTTGAAAACTGCGTGAACACAGCGGTTTCCAAGTATGGAAAACTAGACATCATGCTTAATAACGCAGGTATATGTGATGAGATCAAAACAAGCATACTAGACAACAACAAGTCTGATTTTGAGAGTGTCATAAGCGTGAACTTGGTTGGTCCTTTTCTGGGAACAAAGCACGCTGCAAGAGTCATGATCGCTGCTAAAAGGGGAAGCATAATTAACACAGCTAGTGTTGCTGGAACCTTAGGTGGAGTGGCTACACATGCCTACACAAGTTCAAAGCACGCGCTAATTGGACTGATGAAAAGCACTGCGGTGGAGCTTGGACAGTTTGGTATTCGGGTGAATTGTGTGTCCCCTTATGTGGTTCCCACACCGTTGACCAAGAAACATGCCAATATTGACGAAGAAGGAGTTCGTGAGATTTATTCCAACCTAAAAGGTGTTCATCTTGTGCCGAACGATGTGGCCGAAGCTGCTCTTTACTTGGCAGGTGATGAGTCTAAGTATGTTAGTGGTCACAATCTCGTGTTAGATGGTGGGTACACTGATGTAAATATAGGATTTTCTGTGTTTGATCAAAATAAACTTAACTAA 816 0.4498 MATVSAVSAPIRRLEGKVAIITGGASGIGEATARLFSKHGAHVVIADIQDDLGLSLCKHLESASYVHCDVTKEEDVENCVNTAVSKYGKLDIMLNNAGICDEIKTSILDNNKSDFESVISVNLVGPFLGTKHAARVMIAAKRGSIINTASVAGTLGGVATHAYTSSKHALIGLMKSTAVELGQFGIRVNCVSPYVVPTPLTKKHANIDEEGVREIYSNLKGVHLVPNDVAEAALYLAGDESKYVSGHNLVLDGGYTDVNIGFSVFDQNKLN 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00826 271 CDD secoisolariciresinol-DH_like_SDR_c 13 256 IPR045309 GO:0016616
Gma12g00826 271 PANTHER MOMILACTONE A SYNTHASE 7 262 - -
Gma12g00826 271 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 IPR002347 -
Gma12g00826 271 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 IPR002347 -
Gma12g00826 271 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 IPR002347 -
Gma12g00826 271 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 150 178 IPR020904 GO:0016491
Gma12g00826 271 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 15 256 IPR036291 -
Gma12g00826 271 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 7 262 - -
Gma12g00826 271 Gene3D - 4 268 - -
Gma12g00826 271 Pfam Enoyl-(Acyl carrier protein) reductase 23 256 - -
Gma12g00826 271 PRINTS Glucose/ribitol dehydrogenase family signature 18 35 IPR002347 -
Gma12g00826 271 PRINTS Glucose/ribitol dehydrogenase family signature 88 99 IPR002347 -
Gma12g00826 271 PRINTS Glucose/ribitol dehydrogenase family signature 137 153 IPR002347 -
Gma12g00826 271 PRINTS Glucose/ribitol dehydrogenase family signature 163 182 IPR002347 -
Gma12g00826 271 PRINTS Glucose/ribitol dehydrogenase family signature 184 201 IPR002347 -
Gma12g00826 271 PRINTS Glucose/ribitol dehydrogenase family signature 219 239 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00826 Gma-Chr12 7722881 7723966 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00826 3 256 Acyl Lipid Metabolism Gene Families AT3G55290 32.830 3.60e-32 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00826 - - gmx:100783169 534.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00826 12 7722881 7723966 Gma12g00826 12 7722881 7723966 ECH