Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00825 ATGGAACACATCTGGAAGCATGTGATGCTATTCTACATTGTGCTGCTGTTTCATCACCATTTTCTTCCGGTCAATTCAGAACACCAAAGAAACTTCTCGCATACAGACAGGGCAAGAACAATGGCCATGACAAGTTCAAGAGAAACTATAGCATCAGTTAATAGGCGAGGTGGTGGAGGTCATGGAGGTGGTCACGCAAGCAGCATGGGAATGCATGGTGGTGAGAATGGTGAACACGGCAATTTGCCACGCCCACTTGGCACAAACCCTGTATATGCAGGTGCTGCTGCAGGATCTGCTCACCAGAGAAACAATAATCACCACCATGACATGGCAAGTGTCTCACTGGTCTCAGCTACTGGAAGAAGGCTTGAGGGGAAAGTGGCTATTATCACTGGTGGTGCAAGCGGCATAGGTGAGGCCACTGCAAGACTCTTCTCTAAGCACGGAGCACACGTTGTCATAGCTGATATTCAAGACGATTTGGGTCTCTCTATTTGCAAACACTTGGAATCCGCTTCCTATGTTCACTGCGACGTGACAAACGAAACCGACGTTGAAAACTGCGTGAACACCACCGTTTCCAAACACGGCAAACTAGATATCATGTTCAACAACGCTGGCATAACCGGTGTGAACAAAACCAGCATCCTCGACAACACAAAGTCAGAGTTTGAGGAAGTGATCAACGTTAACCTAGTTGGTGTCTTTCTGGGAACAAAGCACGCCGCAAGGGTAATGATCCCTGCTAGAAGAGGAAGCATAGTTAACACTGCAAGTGTTTGTGGAAGCATAGGTGGTGTAGCATCACATGCATACACAAGTTCCAAACACGCCGTGGTGGGGCTCACAAAGAACACTGCGGTGGAGCTTGGAGCATTTGGTGTTAGGGTTAATTGCGTGTCACCCTACGTGGTTGCCACGCCCTTGGCTAAGAATTTTTTTAAGCTTGATGATGACGGAGTTCAGGGGATTTATTCAAACCTTAAGGGTACTGATCTTGTGCCTAATGATGTAGCCGAAGCTGCTTTGTACCTGGCAAGTGATGAGTCCAAGTATGTTAGTGGGCACAATCTTGTGGTTGATGGAGGCTTCACTGTGGTCAATATGGATGACTTAAAGGCCAACACCGAGTATACCGGTTATACAGTGGCATCAAATGTTGTTCAATGGTTCTGGGAGGTGGTCAAAGCTTTCAACAAGGAAGACATGGCAAGATTACTGCAATTTGTGACTGGAACGTCAAAGGTGATGTAG 1257 0.4702 MEHIWKHVMLFYIVLLFHHHFLPVNSEHQRNFSHTDRARTMAMTSSRETIASVNRRGGGGHGGGHASSMGMHGGENGEHGNLPRPLGTNPVYAGAAAGSAHQRNNNHHHDMASVSLVSATGRRLEGKVAIITGGASGIGEATARLFSKHGAHVVIADIQDDLGLSICKHLESASYVHCDVTNETDVENCVNTTVSKHGKLDIMFNNAGITGVNKTSILDNTKSEFEEVINVNLVGVFLGTKHAARVMIPARRGSIVNTASVCGSIGGVASHAYTSSKHAVVGLTKNTAVELGAFGVRVNCVSPYVVATPLAKNFFKLDDDGVQGIYSNLKGTDLVPNDVAEAALYLASDESKYVSGHNLVVDGGFTVVNMDDLKANTEYTGYTVASNVVQWFWEVVKAFNKEDMARLLQFVTGTSKVM 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00825 418 Pfam HECT-domain (ubiquitin-transferase) 360 417 IPR000569 GO:0004842
Gma12g00825 418 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 253 261 IPR002347 -
Gma12g00825 418 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 273 292 IPR002347 -
Gma12g00825 418 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 198 209 IPR002347 -
Gma12g00825 418 Gene3D Hect, E3 ligase catalytic domain 373 418 - -
Gma12g00825 418 PRINTS Glucose/ribitol dehydrogenase family signature 329 349 IPR002347 -
Gma12g00825 418 PRINTS Glucose/ribitol dehydrogenase family signature 294 311 IPR002347 -
Gma12g00825 418 PRINTS Glucose/ribitol dehydrogenase family signature 247 263 IPR002347 -
Gma12g00825 418 PRINTS Glucose/ribitol dehydrogenase family signature 198 209 IPR002347 -
Gma12g00825 418 PRINTS Glucose/ribitol dehydrogenase family signature 128 145 IPR002347 -
Gma12g00825 418 PRINTS Glucose/ribitol dehydrogenase family signature 273 292 IPR002347 -
Gma12g00825 418 ProSiteProfiles HECT domain profile. 358 418 IPR000569 GO:0004842
Gma12g00825 418 MobiDBLite consensus disorder prediction 52 93 - -
Gma12g00825 418 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 260 288 IPR020904 GO:0016491
Gma12g00825 418 SUPERFAMILY Hect, E3 ligase catalytic domain 364 417 IPR035983 GO:0004842
Gma12g00825 418 Pfam Enoyl-(Acyl carrier protein) reductase 133 366 - -
Gma12g00825 418 PANTHER MOMILACTONE A SYNTHASE 117 369 - -
Gma12g00825 418 CDD secoisolariciresinol-DH_like_SDR_c 123 366 IPR045309 GO:0016616
Gma12g00825 418 Gene3D - 113 372 - -
Gma12g00825 418 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 125 368 IPR036291 -
Gma12g00825 418 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 117 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00825 Gma-Chr12 7711069 7718369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00825 122 367 Acyl Lipid Metabolism Gene Families AT1G24360 31.225 1.05e-30 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00825 - - gmx:100782627 509.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00825 12 7711069 7718369 Gma12g00825 12 7711069 7718369 ECH