Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00818 ATGACTCGCGTTTTGGTTCAGAGGGGTTCTTCCGGTGGTGGTTCTTCGTCGAACCCGAACCGCAGTGGTGGTGGTGGTGGGTCTTCTTCTAATTCCTCGGTGCGAGCGGAGCCGCAGGTTCCGGTTTTGCCGGAGAATAGTGACGAGGTTGTTGTTGTGTCGGATGAGGTTTTGGAGAGTGGTGATAAGGGGAAGAGTGAGGAGGGTGTTCATTTTGAGCAGGGTGATGGGTCGTGTGAAGATGACGTGGCTGCTGTTGTTGTTGAGAGTGATGTTAGGGAGGAGATTGTGAAGGGGTTGAGTGGGCTTAGAGTTGGTGAAAGAGTTGTTTCGGAGAGTGAGGGTTCGAGTGGGGATTCTTCTTCCCTCCTTGTTGGTGGTGGTTCGTGTCCCCCTCCACCTCCGGTGCCGCCTCCCAAGCCTTCCGTGACGGGGAACTTGAATTCGAGGAGGAGTGTGGCCGGGAGTTTGAATTCCGGCAGCGTCGGATCGTCGAGGAGGGCAGTTACGTGGCCGATTGTTTCGGCTAGGACTTCACCTGCTGGGTCTAGGCCGTCTTCTCCCAGGTCACATAATGAAAGTGAGGGGTACAACAGTGCTGATGAACAGAAGCCTTGCCTGGTTTCATCTTATGATGATTTTGAAAGGGAGCGACAGTTCGAAATTGATATCAGAAGGGCAAAAGGTTATGAAGTCAAAAAAATGATGGAGGATGGAAATTGTCTATTCCGAGCTGTTGCAGATCAGGTGTATGGGGATTCTGAAGTGTATGATTTGATCAGACAGATGTGCATAGATTATATGGAGCGAGAGAGAGATCACTTTTCTCAGTTTATAACTGAAGGCTTCACATCTTACTGCAAGAGAAAGAGAAGAGACAAGGTCTATGGAAATAATGTTGAGATCCAAGCCATGTGTGAAATGTATAATCGTCCAATTCACATATACTCCTACACCACAGAACCTATCAATATCTTTCATGGAAGCTACAACACTGACATGCCACCAATACGATTGAGTTATCATCATGGGAATCATTACAACTCCCTTGTTGATCCACGGCGCTTGACAATTGGTGCTGGGCTTGGGTTCAGCAGTCTTCGTGGAACAAATGTTGACAAAGATCAAGTCAAGGCTGCTATTAAAGCTCAACAAGACAAACAGATCAATAATGCACTGTTAGCCGAGGGTCGGTTTTACTCTGATCTCGAGCTCACAGAAAAGGAAATTGAACGCATGGTGATTGAAGTTTCTCGAGCTGAGTACCTTGCAGATAGTACATTTAAGCAACAGCTTGGAGACAGAGAGTCCTCTACCTCAAACGCAGAACCATCATCTTCTGGAGCAACCGGTTCATCTGGCACTGATCGCAAGACGGAACATGGGAAAGAGCATGGTTCTGATCTTAGTAGCGGTATGCAGATGTTACTATCAATGGGATTCAGTTACATGCAAGCGATTGAGGCTTACAGCATATTTGGGGACGATGTTGATTCCATGGTTTGTTACCTGTTAGAAACTGGCAGTAGCAGCAGACGTAAAGGCAAGGCCACTGAATGA 1560 0.475 MTRVLVQRGSSGGGSSSNPNRSGGGGGSSSNSSVRAEPQVPVLPENSDEVVVVSDEVLESGDKGKSEEGVHFEQGDGSCEDDVAAVVVESDVREEIVKGLSGLRVGERVVSESEGSSGDSSSLLVGGGSCPPPPPVPPPKPSVTGNLNSRRSVAGSLNSGSVGSSRRAVTWPIVSARTSPAGSRPSSPRSHNESEGYNSADEQKPCLVSSYDDFERERQFEIDIRRAKGYEVKKMMEDGNCLFRAVADQVYGDSEVYDLIRQMCIDYMERERDHFSQFITEGFTSYCKRKRRDKVYGNNVEIQAMCEMYNRPIHIYSYTTEPINIFHGSYNTDMPPIRLSYHHGNHYNSLVDPRRLTIGAGLGFSSLRGTNVDKDQVKAAIKAQQDKQINNALLAEGRFYSDLELTEKEIERMVIEVSRAEYLADSTFKQQLGDRESSTSNAEPSSSGATGSSGTDRKTEHGKEHGSDLSSGMQMLLSMGFSYMQAIEAYSIFGDDVDSMVCYLLETGSSSRRKGKATE 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00818 519 MobiDBLite consensus disorder prediction 428 470 - -
Gma12g00818 519 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 466 507 IPR015940 -
Gma12g00818 519 Pfam OTU-like cysteine protease 238 347 IPR003323 -
Gma12g00818 519 PANTHER OTU DOMAIN-CONTAINING PROTEIN 5-LIKE ISOFORM X1 118 483 - -
Gma12g00818 519 MobiDBLite consensus disorder prediction 1 37 - -
Gma12g00818 519 MobiDBLite consensus disorder prediction 128 142 - -
Gma12g00818 519 MobiDBLite consensus disorder prediction 1 80 - -
Gma12g00818 519 SUPERFAMILY UBA-like 470 506 IPR009060 GO:0005515
Gma12g00818 519 MobiDBLite consensus disorder prediction 143 194 - -
Gma12g00818 519 Gene3D - 212 363 - -
Gma12g00818 519 ProSiteProfiles OTU domain profile. 230 353 IPR003323 -
Gma12g00818 519 MobiDBLite consensus disorder prediction 99 202 - -
Gma12g00818 519 MobiDBLite consensus disorder prediction 56 78 - -
Gma12g00818 519 SUPERFAMILY Cysteine proteinases 217 353 IPR038765 -
Gma12g00818 519 PANTHER OTU DOMAIN CONTAINING PROTEIN 118 483 - -
Gma12g00818 519 MobiDBLite consensus disorder prediction 430 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00818 Gma-Chr12 7627026 7632647 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00818 K12655 - gmx:100809162 894.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00818 12 7627026 7632647 Gma12g00818 12 7627026 7632647 ECH
Gma12g00818 12 7627026 7632647 Gma11g01487 11 15684843 15693860 GST