Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00801 ATGGCGGTGCGGTCCACAGTGTCGCGTTTCCCGATGGACACGGACGCGCGCGAGGGCTCCGGCCTGCTCTGGGGTGTCACCGTCACGCCGTTCGCCGCCACCGACGAGAACACCCGCGCTCCGTCGTACGGCTCCGGCGGCGACCTCTTGCCCCGGTGCGAGAACTGCTGGGCCTACTTCAACACCTACTGCGAGCTCGAGCAGTGGTCCTGGTCCTGCTCCCTCTGCGGCAACCTCAATGGACTCTCCTCCGACGCCATCGACCGCTACTCTCGCCCTCAGTCCTGCGCCGAGATGATGTCCTCCTTCGTAGATCTCGAATTGCCTTCGCAGGAATCCGCAGAGGTAGCGGCAATGCAGGCGTGTCCGGTTTATGTTGCTGCTGTTGACTTGTCCTCTTCAGAGGAGTTTCTAGAACTTATTAAAAGTGCATTGCTGGCAGCTCTGGAAGCTCTTGCTCCTGGTTCACTTTTTGGGCTTGCTACATTCAGCCACAAACTAGGATTGTATGATGTTCAAGGTCCAATACCTGTTGTGAAAAATGTTTTTATCCCTCCTGATGCAGAGGGAACCTTGCCCATTGAGCTTGAAGATGTCATGCCTTTGTTACAGTTTCTGGCTCCTGTGGAAACTTGTAAGGACCGTATTGCATCTGCACTTGAAACACTTAGACCAACAACTTCATGGGAGAGAACCACGGCAGCAGGTCAAGGGCTGGATGGTGTTCTGATAGGTGGGCGTGGTTTTGGGATGGCAATGGAAGCTCTCTGCAATTACCTTGGATCTGAATATGGGAACACTTTTGCTTTAGCTAGAGTCTTTGCCTTCTTGTCTGGTCCCCCTGATTATGGAGCTGGACAATTGGACACAAGACGATATGGTGAACAATATGCAAGCAAAGGAGAGGATGCTGATCGTGCTTTACTCCCGGAGCAGACACCCTTTTATAAAGATCTGGCTGCTGTTGCTGTTCAAGCAGGTGTATGTGTTGACATATTCGCCGTAACAAATGAGTACACTGATTTGGCATCCCTAAAATTTCTGAGTATTGAAAGTGGGGGTTCCTTATTTTTATACACAAGTACCGAGGATTCAACATTGCCTCAGGACATGTATCGGATGCTGAGTCGACCGTATGCTTTTGGTTGTGTCCTGCGGTTAAGAACCTCGACTGAATTTAAACCTGGCAATTCTTATGGTCACTTCTTTCCAGATCCACAGTATGAAAATGTTCAACACATCATATGTTGTGATTCTTATGCTACATATGCTTACGACTTTGTGTTTGAGAACAACGTTGGATTTTCAAGAACTAAATCAGATGTTCCTACAATTCAGATTGCATTTCAGTACTCAGTTGTAGTTCCTCCTCAGGAACTTTCTATTTCTAATTCAGGAGGGGTTTCTACAAATAGAACCAAGCATTCCCTTCAGCGCCGGCTAAGGATCCGAACATTGCAATTTGGTGTTGCTCAGAACATTCATGAACTTTATGATAGCTGTGATCCCGAAGTTGTTCTATCTTTGCTTGTTCACAAGGTTATATTAGCCTCTTTGGAGGAAGGAGTTAGGGAGGGTAGAATTTTGCTTCAAGAATGGCTAGTGATCCTCACAGCTCAGTACAACGATGCATATAAGCTTATTCAGTATAATAATGGAAGTTCCGTAAGATCTCAGATTGATGTTGCATTCTCTCAATGTCCTCAATTGCAGCCCCTACCACGCCTAATTTTTGCTCTACTTCGAAATCCTCTTCTCCGCTTTCATGAAGAGGGTGTTCATCCTGACTATCGCATCTATCTTCAATGCCTTTTCAGCATGTTGGAACCCAGTTCCCTTCATCGTGCTGTGTATCCCGTGTTGACATCATATGCTACTCCAGATAAACAAGCATATCCTCGTCATTCATTGAGTCGTGCAGCACTGATTACCAGTGGCAGTCCGATATTTTTCCTTGATGCATTCACAATTCTGATTGTGTTTTATTCTTCGACTGCAGACCCGACACTTCCTTTTCCTCCACCCCATGATTGTTTGTTAAGGACTACAATCAACAAATTGAAGCAAGAGAGATGCATCACTCCCAAGCTCATTTTTATTCGAGGAGGGCATGATGATGCCTCAATTTTTGAGAACTTTCTGATCGAAGAGCAGGATGTTGATGGAAGTGGTCTTACCAGTGTGATGGGTTTTGTTTCTTTCCTTGAAGACATTACACAGAAAGTTTTGGAATTCATGAAATAG 2244 0.463 MAVRSTVSRFPMDTDAREGSGLLWGVTVTPFAATDENTRAPSYGSGGDLLPRCENCWAYFNTYCELEQWSWSCSLCGNLNGLSSDAIDRYSRPQSCAEMMSSFVDLELPSQESAEVAAMQACPVYVAAVDLSSSEEFLELIKSALLAALEALAPGSLFGLATFSHKLGLYDVQGPIPVVKNVFIPPDAEGTLPIELEDVMPLLQFLAPVETCKDRIASALETLRPTTSWERTTAAGQGLDGVLIGGRGFGMAMEALCNYLGSEYGNTFALARVFAFLSGPPDYGAGQLDTRRYGEQYASKGEDADRALLPEQTPFYKDLAAVAVQAGVCVDIFAVTNEYTDLASLKFLSIESGGSLFLYTSTEDSTLPQDMYRMLSRPYAFGCVLRLRTSTEFKPGNSYGHFFPDPQYENVQHIICCDSYATYAYDFVFENNVGFSRTKSDVPTIQIAFQYSVVVPPQELSISNSGGVSTNRTKHSLQRRLRIRTLQFGVAQNIHELYDSCDPEVVLSLLVHKVILASLEEGVREGRILLQEWLVILTAQYNDAYKLIQYNNGSSVRSQIDVAFSQCPQLQPLPRLIFALLRNPLLRFHEEGVHPDYRIYLQCLFSMLEPSSLHRAVYPVLTSYATPDKQAYPRHSLSRAALITSGSPIFFLDAFTILIVFYSSTADPTLPFPPPHDCLLRTTINKLKQERCITPKLIFIRGGHDDASIFENFLIEEQDVDGSGLTSVMGFVSFLEDITQKVLEFMK 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00801 747 Gene3D - 29 101 - -
Gma12g00801 747 PANTHER OS05G0443300 PROTEIN 1 745 - -
Gma12g00801 747 Pfam Sec23/Sec24 trunk domain 122 374 IPR006896 GO:0006886|GO:0006888|GO:0030127
Gma12g00801 747 Gene3D Sec23/Sec24 helical domain 472 631 - -
Gma12g00801 747 SUPERFAMILY Helical domain of Sec23/24 502 618 IPR036175 GO:0006886|GO:0006888|GO:0030127
Gma12g00801 747 Pfam Sec23/Sec24 helical domain 502 614 IPR006900 GO:0006886|GO:0006888|GO:0030127
Gma12g00801 747 PANTHER SEC24-RELATED PROTEIN 1 745 - -
Gma12g00801 747 SUPERFAMILY beta-sandwich domain of Sec23/24 3 501 - -
Gma12g00801 747 Gene3D von Willebrand factor, type A domain 122 379 IPR036465 -
Gma12g00801 747 SUPERFAMILY Zn-finger domain of Sec23/24 45 110 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Gma12g00801 747 SUPERFAMILY vWA-like 123 377 IPR036465 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00801 Gma-Chr12 7468044 7478309 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00801 - - gmx:100807557 1485.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00801 12 7468044 7478309 Gma12g00801 12 7468044 7478309 ECH
Gma12g00801 12 7468044 7478309 Gma11g01502 11 15866620 15873800 GST