Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00797 ATGTGGAAGATACGACACATTACCATTCATAATAAACCCCAAAACAAAGTTCTtctctctctctctctctctctctctcGTGAATCATCACTTCGTTTTCCCCGCTTTCAACACCGCTCATCTTCTCTTCTCTTTTCTCTGCTAATCATGGCAACCTTGTCTACTATGAAAGTTTCCCCTCATTGCACATTACAAACTGCAAGCAAAAATCCATCCATTGTTGCCACCATAGTGAAGTGTCCTTCTTCTTTAAGGTCTGTGAAGAGCGTTTCCAGATCTTTCGGCTTGAAGTCGGCCTCTTCATTTAGAGTCACTGCCATGGCTTCTTACAAGGTTAAGCTGATTGGCCCAGATGGAACAGAGAACGAGTTCGAAGCCACTGACGATACTTACATCTTAGATGCAGCAGAGAGTGCTGGAGTTGAACTTCCTTACTCATGCCGAGCTGGAGCATGCTCCACCTGTGCTGGGAAGATTGTTTCTGGTTCTGTGGACCAGTCCGATGGCTCATTCCTCGATGACAACCAACTGAAGGAAGGCTTTGTTCTTACCTGTGTCTCCTATCCAACTGCAGACTGTGTAATTGAAACTCACAAGGAAGGAGATCTCTACTGA 615 0.4309 MWKIRHITIHNKPQNKVLLSLSLSLSRESSLRFPRFQHRSSSLLFSLLIMATLSTMKVSPHCTLQTASKNPSIVATIVKCPSSLRSVKSVSRSFGLKSASSFRVTAMASYKVKLIGPDGTENEFEATDDTYILDAAESAGVELPYSCRAGACSTCAGKIVSGSVDQSDGSFLDDNQLKEGFVLTCVSYPTADCVIETHKEGDLY 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00797 204 TIGRFAM fdx_plant: ferredoxin [2Fe-2S] 108 204 IPR010241 GO:0009055|GO:0022900|GO:0051537
Gma12g00797 204 CDD fer2 112 196 IPR001041 GO:0051536
Gma12g00797 204 PANTHER FERREDOXIN 54 204 - -
Gma12g00797 204 Gene3D - 107 204 IPR012675 -
Gma12g00797 204 SUPERFAMILY 2Fe-2S ferredoxin-like 105 201 IPR036010 GO:0051536
Gma12g00797 204 ProSiteProfiles 2Fe-2S ferredoxin-type iron-sulfur binding domain profile. 110 201 IPR001041 GO:0051536
Gma12g00797 204 PANTHER FERREDOXIN 54 204 - -
Gma12g00797 204 ProSitePatterns 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 147 155 IPR006058 GO:0051537
Gma12g00797 204 Pfam 2Fe-2S iron-sulfur cluster binding domain 117 190 IPR001041 GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00797 Gma-Chr12 7436523 7439440 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00797 K02639 - gmx:100499711 290.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00797 12 7436523 7439440 Gma12g00797 12 7436523 7439440 ECH
Gma12g00797 12 7436523 7439440 Gma11g01506 11 15906836 15909509 GST