Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00793 ATGGACCAGCTTCCTGTTGAAGTGATTGGGAACATTCTGTCACACTTGAGGGCTGCAAGAGATGTGGTGATAGCTTCCGCATCATGCAGGAAATGGCGACTAGCGTGCTGCAAGCACCTTCATACACTCTCCTTCAACTCCAAAGATTGGCCCATTTACCGGGATTTGACAACTACCCGCCTTGAGATTTTGATCACACAAACCATTTTCCAGACCTCAGGGTTGCAGTCCCTCTCCATTTTGATGGAAGATGTGGATGAATTCTCGGCTTCCACTGTTACTGCTTGGCTCTTGTACACCAGGGAAACTCTCAGGCAATTGCATTATAATGTCAAGACTACGCCTAATGTTAACATTCTTGAAATATGTGGCAGGCATAAGCTGGAAATACTGGATCTGGCTCATAATTCCATTGTGGGGGTTGAGCCTAATTATCAGCGGTTCCCTTGTTTGAAATCTCTTTCCTTGAGTTATGTTAGTATATCTGCATTGGATCTAAATCTTTTGGTGTCTGCATGTCCGAAGATTGAAACTTTTGAACTTGTCAATCCAGAGATTGCAATGTCTGATGCACAGGTGACCGTTGAATTGAGTAGCTCAACGCTGAAGAGTGTGTATGTAGAAGCAATTAGTTTGGACAAGTTTTTATTGGAGGCTGATGGGCTTGAGTGCTTGCACTTGAAAGATTGTGCACTCGAGTTTTTTGAACTCATTGGCAAGGGGACCTTGAAGCATTTTAAGATTGATGATGTTAGTGTTATACATCTTGATATTGGTGAGACAGTTGAGAATCTTGAGACTGTGGATATCAGCAACTTCCCAATTATATGGCCAAAGTTTTACCAGATGATTTCAAGATCGTCGAATTTGAAGAGGCTTCGGCTTTGGGATGTAATGTTTGATGATGAGGATGAGGTTGTGGATTTGGAAACAATCGCGACTTGCTTTCCCTACCTGAGCCATTTATCTCTGAGTTATGATGTGAGGGATGGAGTGCTTTACTATGGTTTACAAGGCTCTTCCTATCTGGAGAGTGTTGTTGTCTTGGAGCTTGGCTGGACTGTGATCAATGATCTTTTCTCCCACTGGGTTGAGGGTCTGCTCAAGCGTTGCCCCAATCTGAAGAAGTTGGTCATTCATGGGATTGTTTCTGAGGCTAAGTCTCATGAAGAATGCCAGATGTTAGCCAATTTCACTACATCCATGGTTGAGCTGATGAGGAGATACACACATGCCATAAATGTAAAATATGAAGCCACTGCAATGGATTCAATTTTGAGGGAAGAGAGTTATGATGAGTGGCGGCATTCCAGTGGCCTTCCAAGGGGAGGTAATGGATTTAGGCTCTTCACTCTTGAGGAGTGCAAGTTTACCCCTTTATTTGCTGGACATGTTATGGCTATCTTTCCTTCTCTTGTGTGCCTTGTGCTTTTCTCTGCAGCCTCTTGTGTGGCCATTATTTTAGCTTGA 1470 0.434 MDQLPVEVIGNILSHLRAARDVVIASASCRKWRLACCKHLHTLSFNSKDWPIYRDLTTTRLEILITQTIFQTSGLQSLSILMEDVDEFSASTVTAWLLYTRETLRQLHYNVKTTPNVNILEICGRHKLEILDLAHNSIVGVEPNYQRFPCLKSLSLSYVSISALDLNLLVSACPKIETFELVNPEIAMSDAQVTVELSSSTLKSVYVEAISLDKFLLEADGLECLHLKDCALEFFELIGKGTLKHFKIDDVSVIHLDIGETVENLETVDISNFPIIWPKFYQMISRSSNLKRLRLWDVMFDDEDEVVDLETIATCFPYLSHLSLSYDVRDGVLYYGLQGSSYLESVVVLELGWTVINDLFSHWVEGLLKRCPNLKKLVIHGIVSEAKSHEECQMLANFTTSMVELMRRYTHAINVKYEATAMDSILREESYDEWRHSSGLPRGGNGFRLFTLEECKFTPLFAGHVMAIFPSLVCLVLFSAASCVAIILA 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00793 489 PANTHER - 1 416 - -
Gma12g00793 489 Pfam F-box-like 2 39 IPR001810 GO:0005515
Gma12g00793 489 PANTHER F-BOX PROTEIN-LIKE 1 416 - -
Gma12g00793 489 SUPERFAMILY RNI-like 71 382 - -
Gma12g00793 489 Gene3D Ribonuclease Inhibitor 13 479 IPR032675 -
Gma12g00793 489 SUPERFAMILY F-box domain 1 57 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00793 Gma-Chr12 7387729 7389740 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00793 - - gmx:100804357 809.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00793 12 7387729 7389740 Gma12g00793 12 7387729 7389740 ECH