Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00731 ATGGCACTCCCTCACTCCATCTCTGCCTTAGCCACCACACTCACACTCTCCTCGCCAACAACCAAACCCCAGAAAGTTAACCCCTTTCCCTTTTTCTCGAACCAAAAGACACGATTTTTAACGAAACAAACGCGACCCAGAAGCAGAAGAAGCCTCTCCCTAACCCCTGCACGCGTTGCGGCGCCACCCTCAACTGTTGAAGCCGATCAATCATACCCGGAGACCGAAAATAACGAAACTGAGGAAGAGTTTAACGATGAAAGCTCTTATTCTAAATTCACTTGGAGGGATCACTGGTACCCTGTTTCGTTGATCGAAGATCTGAACCCTCTCTTGCCCACACCGTTTCAGCTTCTGGGTCGTGAAATCGTGCTCTGGTACGACAAGTCCATTTCCCAATGGGTTGCTTTTGATGACAAATGCCCCCATCGTCTTGCCCCTTTGTCTGAAGGGAGGATTGATGAAGATGGGAAGTTGCAGTGTTCTTATCATGGGTGGTCTTTTGATGGGTGTGGATCTTGTGTTAAGATACCTCAGGCTGCATCTGAAGGCCCCGAAGCACAGAAAGCAAAGGCCTCCAAGCCTCCAATGTTGCCTGATGACTTTGACAAACCGGAGTTTGCCACGGTCAACATTCAGCGTGATCTGTTCTATGGTTACGATACTCTCATGGAGAATGTCTCTGATCCTTCTCACATTGAGTTTGCTCATCACAAGGTCACAGGAAGGAGAGACAGAGCCAAGCCTCTGCCATTCAAGATGGATTCTCGTGGTTCATGGGGCTTCTCTGGAGCTAATGAAGGGAACCCACAGATCAGTGCCAAGTTTGTTGCACCATGTTATATGATGAACAAGATTCAGATTGATACCAAACTCCCTGTAGTTGGTGACCAGAAATGGGTAGTATGGATATGTTCCTTCAATGTCCCCATGGCACCCGGTAAGACTCGCTCCATAGTTTGCAGTGCTCGAAACTTCTTCCAGTTCTCAGTGCCAGGGCCAGCCTGGTGGCAAGTCGTTCCTAGATGGTATGAGCATTGGACTTCAAACAAGGTATATGATGGAGACATGATTGTTCTTCAAGGCCAAGAGAAAATCTTCCTTTCAGAAACCAAGGAAGGTGGAGACATTAACAAACAGTATACAAACATCACCTTCACACCAACACAGGCAGATCGCTTTGTCTTGGCATTTCGAAACTGGCTAAGGCGGCATGGCAATGGCCAACCAGAATGGTTTGGCAACAGCAGCGACCAACCATTGCCATCAACTGTTTTATCAAAACGTCAGATGTTGGATAGATTTGAACAGCACACTCTCAAGTGTTCATCATGTAAAGCAGCATATGAGGGATTCCAAACATGGCAGAAAGTCCTAATTGGTACAACAGTTGTGTTTTGTGCAACATCAGGGATCCCATCAGATGTCCAGTTGCGTGTACTTTTGGCTGGACTCGCAATTGTCAGTGCAGCCATAACTTTTGCCCTAAATCAACTCCAAAAGAATTTTGAATTCGTGGATTACGTGCATGCCGAAATTGATTAA 1545 0.4667 MALPHSISALATTLTLSSPTTKPQKVNPFPFFSNQKTRFLTKQTRPRSRRSLSLTPARVAAPPSTVEADQSYPETENNETEEEFNDESSYSKFTWRDHWYPVSLIEDLNPLLPTPFQLLGREIVLWYDKSISQWVAFDDKCPHRLAPLSEGRIDEDGKLQCSYHGWSFDGCGSCVKIPQAASEGPEAQKAKASKPPMLPDDFDKPEFATVNIQRDLFYGYDTLMENVSDPSHIEFAHHKVTGRRDRAKPLPFKMDSRGSWGFSGANEGNPQISAKFVAPCYMMNKIQIDTKLPVVGDQKWVVWICSFNVPMAPGKTRSIVCSARNFFQFSVPGPAWWQVVPRWYEHWTSNKVYDGDMIVLQGQEKIFLSETKEGGDINKQYTNITFTPTQADRFVLAFRNWLRRHGNGQPEWFGNSSDQPLPSTVLSKRQMLDRFEQHTLKCSSCKAAYEGFQTWQKVLIGTTVVFCATSGIPSDVQLRVLLAGLAIVSAAITFALNQLQKNFEFVDYVHAEID 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00731 514 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 99 182 IPR017941 GO:0051537
Gma12g00731 514 PANTHER PHEOPHORBIDE A OXYGENASE, CHLOROPLASTIC 19 187 - -
Gma12g00731 514 PANTHER PHEOPHORBIDE A OXYGENASE, CHLOROPLASTIC 188 514 - -
Gma12g00731 514 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 19 187 - -
Gma12g00731 514 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 188 514 - -
Gma12g00731 514 Gene3D - 204 409 - -
Gma12g00731 514 SUPERFAMILY Bet v1-like 192 410 - -
Gma12g00731 514 Pfam Pheophorbide a oxygenase 276 371 IPR013626 GO:0010277
Gma12g00731 514 Gene3D - 94 199 IPR036922 GO:0051537
Gma12g00731 514 SUPERFAMILY ISP domain 92 182 IPR036922 GO:0051537
Gma12g00731 514 MobiDBLite consensus disorder prediction 43 87 - -
Gma12g00731 514 Pfam Rieske [2Fe-2S] domain 98 181 IPR017941 GO:0051537
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00731 Gma-Chr12 6591629 6596273 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00731 K13071 - gmx:778121 1019.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00731 12 6591629 6596273 Gma12g00731 12 6591629 6596273 ECH