Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00694 ATGGCCTCAACCAACGCTCTCTCTTCAGCCTCCATTCTACGCTCTCCCAACCGCCAGTCTCTGACCCGAAGAGCGAACCATAATGGAAGAGTAAATTACCGGAAACCGAATAACCGTTTCTCCGTGAAAGCCTCCGCCAAAGAGATTGCCTTTGACCAGCATTCCCGCTCTGCTATGCAGGCCGGCATTGACAAGCTCGCCGACGCTGTTGGGCTCACTCTTGGGCCCAGAGGGAGGAATGTTGTGTTGGATGAGTTTGGAAGTCCTAAAGTGGTCAACGATGGTGTCACCATTGCTCGCGCAATCGAGCTTCCCGATCCTATGGAGAATGCTGGTGCAGCTCTTATCAGAGAGGTTGCTAGCAAGACTAACGACTCTGCGGGTGATGGGACTACCACGGCTTCGGTTCTTGCTCGCGAGATAATTAAGCTGGGGCTTCTCAGTGTGACTTCTGGGGCAAATCCTGTGTCTCTTAAGAGAGGGATTGATAAGACTGTGCAGGGTTTGGTGGAGGAGTTGGAGAAGAAGGCTAGGCCTGTCAAAGGTGGAGATGATATCAAAGCTGTTGCTTCCATTTCTGCTGGAAATGATGAGTTGATTGGGCAAATGATTGCGGAAGCAATTGATAAGGTTGGACCTGATGGTGTTTTGTCCATTGAGTCTTCATCATCGTTTGAGACCACAGTTGAAGTGGAAGAAGGAATGGAGATTGACAGAGGGTATATCTCGCCTCAATTTGTTACAAACCCTGAGAAGTTGATTGTTGAATTTGAGAATGCGAGAGTGTTGATTACAGATCAGAAGATTTCAGCAATAAAAGACATTATACCACTGTTGGAGAAAACCACTCAGTTGAGAGCTCCTTTGCTTATCATTGCCGAGGATGTCACTGGTGAGGCTTTGGCCACCCTTGTCGTGAATAAGCTGCGTGGTATCCTTAACGTTGCTGCCATTAAAGCTCCTGGCTTTGGTGAGCGGCGAAAGGCCCTGCTTCAAGACATTGCTATATTGACTGGTGCTGAGTTCCAAGCTAGTGATCTGGGTCTGCTTGTTGAAAACACCTCAGTGGAGCAGCTTGGTTTGGCTAGGAAAATTACCATCTCCAAGGATTCTACCACTGTCATTGCTGATGCTGCGACAAAGGATGAGTTGCAAGCCAGGGTTGCTCAGTTAAAGAAGGAGCTGTCTCAGACAGACTCAGTATATGATACTGAGAAACTGGCTGAGAGGATAGCTAAACTGTCTGGTGGAGTTGCAGTCATCAAGGTTGGTGCTGCTACAGAGACTGAGCTTGAGGATCGGAAGCTCCGAATAGAGGATGCCAAGAATGCAACTTTTGCTGCCATTGAGGAAGGTATTGTACCTGGGGGTGGCACTGCACTGGTTCATCTCTCCACTCATGTCCCAGCAATCAAGGACAAGCTTGAGGATGCAGATGAGAGGCTAGGAGCTGACATTGTGCAAAAGGCACTGATAGCTCCTGCAGCATTGATTGCTCAAAATGCTGGAATAGAAGGTGAAGTTGTTGTGGAGAAAATAAAGAGTGGTGAATGGGAGGTCGGTTACAAtgccatggcagacaggtatgagaatttagtggaggctggagttatcgaccctgccaagAACATTCGAACCAGAGAAGAGAACGATGACTATATGGAACTACGTCGTCACAGCTCACAAACCCACCAACGTCACCCACTCCTGCGTCGGCAATTTCACCAGTCCTCGAGACCTCTATCTCATCATCGCGAAATGCACGCGCATCTAGATTCACCTGCTTTCTCCCCAAGGCTTGCAGAGCATTTATTGAAGCAAAGTTTGGATTATGATAACTACAAGTGCAAAGGGCATCTTTCTGTGCTAGTTATGCTATCTCAGAAGTTTAGTCTTGTGAACATAAAGTTGAAATGGGTGAAAGATAGGACATTGGATGCTGTTGTTACTGGTCAGAGGGATCTTAAGGCAGTTGGGATTCTTGTCTCCATCATTTATTCTTCTTCTGAATGCTGCCTTCCAATTTATCATCTTTCTCGCCACCGTGGACAACTTGGTCTTCCCAGTGACCTCAAACTTTCCACCTTTATAAGAAGATATCCCAACATATTTAATGAGTCCTCTTTTCTTGATAGTGGAGGCTCTCCTGTTCCGTGTTTCAGTTTGAGTCCTGAAGCCTTGGAGCTCCATCATGAGGAAGTCAACATCCTTCAGCAAAATCAGTTGGAACTCAGGGATAGGCTGTGCAAACTGCTTATGCTCACAAGTGATAGGATCCTTCCACTACAAACCATTGACCAGTTAAAATGGGACTTGGGTTTACCATACGATTACCAGCATTCTTTTGTTCCAAATCATCCTGAAAGTTTCTTATATGTTCGCCTTCCTGATGATCGTATTGGCCTGAAATTGTTATTTTGGGATGACAAGCTTGCCATCCCTGAGTTACAGAAGAATACTTCTCTACAACAAAAGGCAGAAGACATAAAAAATGGATCCTTAGAATTTCCAATTAGTTTCACCAGGGGTTTTGGTTTGAAAAGAAAATGCATGGAGTGGTTGAAAGAGTGGCAGAAACTCCCTTATACTTCACCTTACATCAATGCCTCTCATTTGGATCCCCGTACTGATGTATCTGAGAAAAGGATAGTTGGAGTCTTCCATGAGCTCCTTCATCTCACACTCCATAAGCAAACCGAGCGCAAGAACGTTAGCAACTTGCGTAGACCCTTGGCCTTACCTCAGAAGTTTACTAAAGTATTTGAGCGTCATCCTGGTATTTTTTATATTTCCAAGAGGAGTGATACCCAAACAGTTGTTCTTAGGGAGGCCTATAATGGTCAGGAACCTGTGCAGAATCATGCCCTTGTACAAATTAGAGAGGAATTTGCAAGCCTGTTGAAGAAAGGGCTATTGGATAGGAGTAAGGGTGTATACAAAAAAAGCAGACACACTAATTTGGTGGAGGGTTTGAGAAAGGAGGTTTGCATTGCTAAAAAAACTAACCAGCTTAGTTCTGAGGATGAATCAGATTCCATGTTTTTCTGA 3048 0.4449 MASTNALSSASILRSPNRQSLTRRANHNGRVNYRKPNNRFSVKASAKEIAFDQHSRSAMQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVQGLVEELEKKARPVKGGDDIKAVASISAGNDELIGQMIAEAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLIVEFENARVLITDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLVENTSVEQLGLARKITISKDSTTVIADAATKDELQARVAQLKKELSQTDSVYDTEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGTALVHLSTHVPAIKDKLEDADERLGADIVQKALIAPAALIAQNAGIEGEVVVEKIKSGEWEVGYNAMADRYENLVEAGVIDPAKNIRTREENDDYMELRRHSSQTHQRHPLLRRQFHQSSRPLSHHREMHAHLDSPAFSPRLAEHLLKQSLDYDNYKCKGHLSVLVMLSQKFSLVNIKLKWVKDRTLDAVVTGQRDLKAVGILVSIIYSSSECCLPIYHLSRHRGQLGLPSDLKLSTFIRRYPNIFNESSFLDSGGSPVPCFSLSPEALELHHEEVNILQQNQLELRDRLCKLLMLTSDRILPLQTIDQLKWDLGLPYDYQHSFVPNHPESFLYVRLPDDRIGLKLLFWDDKLAIPELQKNTSLQQKAEDIKNGSLEFPISFTRGFGLKRKCMEWLKEWQKLPYTSPYINASHLDPRTDVSEKRIVGVFHELLHLTLHKQTERKNVSNLRRPLALPQKFTKVFERHPGIFYISKRSDTQTVVLREAYNGQEPVQNHALVQIREEFASLLKKGLLDRSKGVYKKSRHTNLVEGLRKEVCIAKKTNQLSSEDESDSMFF 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00694 1015 Hamap Chaperonin GroEL [groEL]. 45 587 IPR001844 GO:0042026|GO:0140662
Gma12g00694 1015 MobiDBLite consensus disorder prediction 1 35 - -
Gma12g00694 1015 CDD GroEL 47 546 IPR001844 GO:0042026|GO:0140662
Gma12g00694 1015 TIGRFAM GroEL: chaperonin GroL 46 547 IPR001844 GO:0042026|GO:0140662
Gma12g00694 1015 Gene3D - 49 546 IPR027413 -
Gma12g00694 1015 PRINTS 60kDa chaperonin signature 310 333 IPR001844 GO:0042026|GO:0140662
Gma12g00694 1015 PRINTS 60kDa chaperonin signature 70 96 IPR001844 GO:0042026|GO:0140662
Gma12g00694 1015 PRINTS 60kDa chaperonin signature 440 461 IPR001844 GO:0042026|GO:0140662
Gma12g00694 1015 PRINTS 60kDa chaperonin signature 392 417 IPR001844 GO:0042026|GO:0140662
Gma12g00694 1015 PRINTS 60kDa chaperonin signature 125 152 IPR001844 GO:0042026|GO:0140662
Gma12g00694 1015 PANTHER BNAA04G16190D PROTEIN 1 547 - -
Gma12g00694 1015 SUPERFAMILY GroEL equatorial domain-like 50 545 IPR027413 -
Gma12g00694 1015 PANTHER 60 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 547 - -
Gma12g00694 1015 ProSitePatterns Chaperonins cpn60 signature. 447 458 IPR018370 GO:0005524|GO:0006457
Gma12g00694 1015 Pfam Plant organelle RNA recognition domain 640 970 IPR021099 GO:0003723
Gma12g00694 1015 Coils Coil 381 401 - -
Gma12g00694 1015 Gene3D - 179 452 IPR027410 -
Gma12g00694 1015 Gene3D GroEL 234 415 IPR027409 -
Gma12g00694 1015 SUPERFAMILY GroEL-intermediate domain like 179 244 IPR027410 -
Gma12g00694 1015 Pfam TCP-1/cpn60 chaperonin family 66 544 IPR002423 GO:0005524
Gma12g00694 1015 SUPERFAMILY GroEL apical domain-like 226 418 IPR027409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00694 Gma-Chr12 6169956 6179736 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00694 - - gmx:100775463 1011.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00694 12 6169956 6179736 Gma12g00694 12 6169956 6179736 ECH
Gma12g00694 12 6169956 6179736 Gma11g01611 11 17373192 17377021 GST