Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00664 ATGGATGACGAATTGCTCGAGCTGCAGCGACAATTCGAGTTCGCACAGCAAGCCAAGTCCAGCATTCGATTATCGGAGCGAAACGTCGTCGAATTGGTCCAAAAACTGCAGCAACTCCAATTCATCGATTTCGAGCTTCTCCACACTGTCTCCGGCAAAGAATATATCACTCTCGATCAGCTGAGGAACGAGATGGTGGCGGAGGTGAAGAAATTAGGGCGCATTTCTTTGATCGATCTCGCTGACGCTACTGGAGTTGACTTGTACTACGTGGAGAAACAGGCTCAGAGCGTTGTAACGGAACACGGAGAACTGATGTTGACTCAGGGAGAAATTATGTCGGAGTCTTATTGGGACTCGATTGCAGAAGAGATTAACGAGAGGCTTCAGGAATGTAGTCAGATTGCTCTGACCGAACTCGCCGCGCAATTGAACGTAGGTTTGGACTTGGTTTCCTCCGTGTTGGAGCCGCGCCTTGGAACAATTGTGAAAGGAAGGCTTGAAGGTGGACAGTTGTATACTCCTGCCTATGTGGCTCGTGTTGGTGCCATGGTTCGTGGTGCTGTGCGGGGCATCACCGTTCCCACGAATTTGACTGTGGTATGGAGCTCATTGCAGCAGTTGCTGCAAGAAATTGATGGAACCAGTGGTTTGGCTGTTGAAGGATCTTTCTTCCAGTCTTTGTTTAATGGACTTGTGAAGGAAGGCAAGGTTCTAGGGTCGCTTCGTGCAGGAGTACACTGGACGCCCGCTGTATTTGCTGTTGCTCAAAGGGAGTTTGTGGACTCATTCTTTTCTCAGAATTCTTTTATCACATATGAAGCGCTGCACAAACTTGGAATTCCCCAGCCCATTCAATTCTTGCAGTCCAGATATCCTGAAGGCAAGCCGCTAGTTACAACATTTGTTCATTCATCGATGATTGAGATGGTAGATGCTTCTACTGAGGATGCTCTTGACCGTGGTAGCTGGAGTGATTCTCTTTCCTTATTGCCTTCATCATTTACACCCCAAGATGCATCTAAAATGTTGTCCCTATGTCAATCTATTCAAAATGCTGTTAAGTCTAACAAAGCACATATTTTTGGGGATTTTTATGTGTTGAGCAGCAGCTTTATAAAGGACATCTGTGATCGTGTTGTGCGAGAATTGGAGACATCAGGTGTTTCAGGGTCTGCTGGTGACTTTCAAGTATCCAACGAAGCAAAATTAGGGCATGAGTCAAGCAGGTTGAATGACTCCAATGAGATGGCGAGTGATGGTGGTGCCAACAGGCTAGCTGATAAAGGATCAAAGAAAAAAAAGGGGAAAGCCACTGGGAATACAGTAGCAAATCTATCTGAAAGTGCTGCAGATAACCAGGAACAGACTTTGACAAAATCTAAGAGAGGCCAGAAAAGAGGTAAGGATACATCTTCACAGACGTCAGATTCAAAGACAGGTTCTAGGAAAGAATTGCTTAAAATGAAAGAGGATAATCCCGGTCCCTCAGAAGAATGGATCATGCAGAAAATTACAGCATTAGTTTCTGATTTTGAAGAACAAGGTATAGATGACCCTGAAACAATTCTAAGGCCTTTGGCTAACCAATTAAGGCCTACAATAATCAGTTATTGGATGGAGAAAAAGAAGGCATTGCTTACAAACAATGCAGAAAGAATGAAACATTTGCTTGATAATTTGCAAAAGAAACTTGATGAGTCTTTCTTAAACATGCAGCTGTATGAAAAAGCCTTAGAACTGTTTGAAGATGATCAATCAACTTCTGTTGTTTTGCATAGGCATTTACTAAGGACAGTAGCAGCTCCTATGGTGGATATGCTTCTTCAAAACCTGGATGAGCACAACAAATTAAAGAATGGACATGACGAGCAGGAAGCTCCAAATTCTGAATCTGTTTCACTTAGTCCTGGAGACAGAACTGTCATTTTTAAGAGTTTTCCAGGAGCTCTTGCAAATAAGGCTCTTGCTGTTGTAGAAGCATTGGAGGGAAAGAGTGTGGAGATATTCATGGCTGCTTTTAGAATGGTAACAGAAGAGAGTGGGTTGCCTTTGAAAAAGCTTGACAAGAAACTAGAAAGAACACTTTTACATTCATATCGTAAGGAGTTGACAGCTCAAGTTTCTGCTGAGACTGACCCTGTATCGCTTCTTCCAAAAGTTGTGTCTTTACTTTATATCCAGGTTTACCACAAAGCACTTCAAGCTCCTGGAAGGGCCATTTCTGTTGCTATTTCCCATTTAAAGGATAAGCTAGACGAGTCAGCATGCAAGATTTTAACTGATTATCAAACTGCCACAGTGACTCTTTTGACATTATTAGCAGCTTCACCCGGTGATGAAGAGGATTGTGCATCTGATAGGATTTTGAGTAAAAAGGAGCTTCTAGAGAGCCAAATGCTGGACCTCAAAAGCTTGGTTTTGAGCACCTCCCAATCTTCGTAA 2445 0.4323 MDDELLELQRQFEFAQQAKSSIRLSERNVVELVQKLQQLQFIDFELLHTVSGKEYITLDQLRNEMVAEVKKLGRISLIDLADATGVDLYYVEKQAQSVVTEHGELMLTQGEIMSESYWDSIAEEINERLQECSQIALTELAAQLNVGLDLVSSVLEPRLGTIVKGRLEGGQLYTPAYVARVGAMVRGAVRGITVPTNLTVVWSSLQQLLQEIDGTSGLAVEGSFFQSLFNGLVKEGKVLGSLRAGVHWTPAVFAVAQREFVDSFFSQNSFITYEALHKLGIPQPIQFLQSRYPEGKPLVTTFVHSSMIEMVDASTEDALDRGSWSDSLSLLPSSFTPQDASKMLSLCQSIQNAVKSNKAHIFGDFYVLSSSFIKDICDRVVRELETSGVSGSAGDFQVSNEAKLGHESSRLNDSNEMASDGGANRLADKGSKKKKGKATGNTVANLSESAADNQEQTLTKSKRGQKRGKDTSSQTSDSKTGSRKELLKMKEDNPGPSEEWIMQKITALVSDFEEQGIDDPETILRPLANQLRPTIISYWMEKKKALLTNNAERMKHLLDNLQKKLDESFLNMQLYEKALELFEDDQSTSVVLHRHLLRTVAAPMVDMLLQNLDEHNKLKNGHDEQEAPNSESVSLSPGDRTVIFKSFPGALANKALAVVEALEGKSVEIFMAAFRMVTEESGLPLKKLDKKLERTLLHSYRKELTAQVSAETDPVSLLPKVVSLLYIQVYHKALQAPGRAISVAISHLKDKLDESACKILTDYQTATVTLLTLLAASPGDEEDCASDRILSKKELLESQMLDLKSLVLSTSQSS 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00664 814 MobiDBLite consensus disorder prediction 459 473 - -
Gma12g00664 814 Coils Coil 544 578 - -
Gma12g00664 814 MobiDBLite consensus disorder prediction 405 419 - -
Gma12g00664 814 Pfam E3 UFM1-protein ligase 1 4 288 IPR018611 GO:0061666|GO:0071569
Gma12g00664 814 PANTHER E3 UFM1-PROTEIN LIGASE 1 1 812 IPR018611 GO:0061666|GO:0071569
Gma12g00664 814 MobiDBLite consensus disorder prediction 438 458 - -
Gma12g00664 814 MobiDBLite consensus disorder prediction 481 497 - -
Gma12g00664 814 MobiDBLite consensus disorder prediction 405 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00664 Gma-Chr12 5730017 5738326 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00664 1 780 EF-hand Containing Proteins AT3G46220 62.532 0.0 940
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00664 K22755 - gmx:100808087 1501.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00664 12 5730017 5738326 Gma12g00664 12 5730017 5738326 ECH
Gma12g00664 12 5730017 5738326 Gma11g01315 11 11278007 11286955 GST