Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00643 ATGCAAACACCAAAGACAAGAAATGGATCCTCTGATGTGCCTCAGAAGGTGTCTCCACGTGCTGTACGCCAACTCAAGCCTACTACTCTGGACATTGATTCTGCATCTTCTTTAAGTCAGGCTACTAAATCATCAAAAGAAAGAAGCCCCAAAGTCACTGACCGCAGATCACCCAGAAGCCCAGTTATTGAGAGGAAGCGCCCTAGCAAAATATCTGAGTTGGAATCTCAAATTTCTCAACTCCAAAATGATTTGAAGAAGGTGAGGGACCAGTTTATCTTGTCCGAATCATGCAAGAAGCAAGCTCAGCAAGAAGCTGAGGAGTCCAAGGAGCAACTATTGGCCCTATCTGCAAAACTTGAAGAGTCACAAAAACAAGTTCTGGATCTTTGTGCTACTGGAGAAGCTCGTGTTCTTGAGCTCCAGAAAATTGTAGAAGAACGTGATATGGCATGCCGATCTGAGCTTGAGGCCTCCAAAAAGCAGCTCTCAGTTGAGTCTGCTTCCCTGGCATCTGCAGCGAATGAAATTCAGTTGCTCAAGGCGCAACTTGAATTGGTTGCTAATTGTGAGAGCGTGCAATCTCAACATGCAGAATCAGCAGACATGGAGCTACTAAACCTTAAGCAGAACTTGTCAGAAACTCTTTCTCTTGTGGACGCCTTGAAAAACCAAGTAAGGGATTGCAAAGAGTCTGAAGCTCAGGCCCAAGCATTGGTCAATGAAACTACGGTGCAACTTGAGGCCGCAAAAGGAACTGTTGAGTTCCTAAGGGCTGATGTTGCAAGAGCTGTTGATGGCTACAACTCCGTTGCTTTAGAGTTAGACCAGTCTAAAGCTCGGGTGAACTCACTAGAGGCACTTGTTAGCAAAATTGAGAAAGACCCCATCAATAATAAATGCATCCCTTCTGAAAATGTTGCAGATGACCATAAATCTGAGCACCAACCTGAAATATTGAAAGAGGGAGAGGATCCTAATCAGCTGGAAGCAGAAGTTGTTTCTTTGAAGTCCGAGGTTGAACAATTGAGATCTGCTATAGAGACTGCTGAGACTAAATACCAAGAGGAACAGATTCGAAGCATGGTGCAGATCAGGAATGCATATGAGTTAGTAGAGCAGATAAAATCTGAATCAGGTAAGAGGGAATGTGAGCTAGAGGCTGAGTTGAAAAAGAAGAAAGCTGATATTGAAGAGTTGAAGGCTAACCTAATGGACAAGGAAACTGAGTTGCAAGGCATTGTGGAGGAGAATGACAACTTGAACCTAAAGCTTGAAGAGAGCATGTCATCCAAAAATGAGCACAAACTCAAAAGGGAAATTAAAAGACTAGCAGAATGTGTGGCAGAACTGAAGGCGGATATGATGGACAAGGAGACAACACTGCAAAGCATATCTGAAGAGAACGAAATGCTGAAATCGGAAATCAACAACAGTGGCAAAGCGAGAGAGGAAGTTGCTGCTGAAGTAGAGGGAGCCAAGGCGGCAGAACACGAGGCTCTCATGAAACTTGGGATTGTGATGGAGGAAGCAGATAAGAGCAACAAGAAGGCTGCAAGAGTGGCCGAGCAGCTGGAAGCGGCACAAGCTGCAAACTTGGAAATGGAAGCTGAACTGAGAAGACTGAAGGTGCAGTCTGATCAGTGGAGGAAGGCTGCAGAGGCAGCTGCTGCTATGATTTCAACAGGGAACAACAATGGGAGGCTCACAGAGAGAACTGTGTCTTTGGATAACAACAACTATATGTGCTCACCCTATGCTGAAGACATGGATGATGATTTCCAGAGGAAGAAAAATGGCAACATGCTGAAGAAGATTGGAGTCTTGTGGAAGAAGCCTCAAAAATAG 1848 0.447 MQTPKTRNGSSDVPQKVSPRAVRQLKPTTLDIDSASSLSQATKSSKERSPKVTDRRSPRSPVIERKRPSKISELESQISQLQNDLKKVRDQFILSESCKKQAQQEAEESKEQLLALSAKLEESQKQVLDLCATGEARVLELQKIVEERDMACRSELEASKKQLSVESASLASAANEIQLLKAQLELVANCESVQSQHAESADMELLNLKQNLSETLSLVDALKNQVRDCKESEAQAQALVNETTVQLEAAKGTVEFLRADVARAVDGYNSVALELDQSKARVNSLEALVSKIEKDPINNKCIPSENVADDHKSEHQPEILKEGEDPNQLEAEVVSLKSEVEQLRSAIETAETKYQEEQIRSMVQIRNAYELVEQIKSESGKRECELEAELKKKKADIEELKANLMDKETELQGIVEENDNLNLKLEESMSSKNEHKLKREIKRLAECVAELKADMMDKETTLQSISEENEMLKSEINNSGKAREEVAAEVEGAKAAEHEALMKLGIVMEEADKSNKKAARVAEQLEAAQAANLEMEAELRRLKVQSDQWRKAAEAAAAMISTGNNNGRLTERTVSLDNNNYMCSPYAEDMDDDFQRKKNGNMLKKIGVLWKKPQK 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00643 615 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 3 1 615 - -
Gma12g00643 615 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 2, CHLOROPLASTIC-RELATED 1 615 IPR029688 -
Gma12g00643 615 MobiDBLite consensus disorder prediction 47 72 - -
Gma12g00643 615 Coils Coil 205 242 - -
Gma12g00643 615 MobiDBLite consensus disorder prediction 300 323 - -
Gma12g00643 615 Coils Coil 275 295 - -
Gma12g00643 615 Coils Coil 333 360 - -
Gma12g00643 615 MobiDBLite consensus disorder prediction 305 323 - -
Gma12g00643 615 Coils Coil 508 552 - -
Gma12g00643 615 MobiDBLite consensus disorder prediction 29 46 - -
Gma12g00643 615 Coils Coil 71 91 - -
Gma12g00643 615 Coils Coil 99 126 - -
Gma12g00643 615 Coils Coil 434 475 - -
Gma12g00643 615 MobiDBLite consensus disorder prediction 1 17 - -
Gma12g00643 615 MobiDBLite consensus disorder prediction 1 76 - -
Gma12g00643 615 Coils Coil 387 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00643 Gma-Chr12 5396894 5401212 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00643 - - gmx:100798862 1070.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00643 12 5396894 5401212 Gma12g00643 12 5396894 5401212 ECH
Gma12g00643 12 5396894 5401212 Gma11g01341 11 11628610 11635764 GST
Gma13g02932 13 43877719 43883281 Gma12g00643 12 5396894 5401212 PCT
Gma15g00428 15 3656300 3663321 Gma12g00643 12 5396894 5401212 PCT
Gma12g00643 12 5396894 5401212 Gma13g02932 13 43877719 43883281 PCT
Gma12g00643 12 5396894 5401212 Gma15g00428 15 3656300 3663321 PCT