Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00627 ATGGCGAGAGGCGCCTCTCAATCTCAATCCACAGCGTCCCACGCCACCACGCGACCGGGCGTGATGGCTCCTCGCGGCACCGCTGCCGCCACTGCCGGCATGCGCCGTCGCCGCCTCGGCGGAGGAACCAGCTCCGCCTCGGTCAGCGGCGGCTCCGGCGCCGGCGGAAGCAATATGCTGCGGTTCTACACCGACGACGCCCCCGGCCTCAAGATCTCGCCGACGGTGGTGCTCGTCATGAGCCTCTGCTTCATCGGCTTCGTCACCGCGCTCCACGTGTTCGGCAAGCTCTACCGCTATCGTTCCTCCGGCGCCACTGTTTGA 324 0.6821 MARGASQSQSTASHATTRPGVMAPRGTAAATAGMRRRRLGGGTSSASVSGGSGAGGSNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTALHVFGKLYRYRSSGATV 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00627 107 PIRSF Sec61_beta 3 103 IPR030671 GO:0005784|GO:0006886
Gma12g00627 107 PANTHER SEC61 SUBUNIT BETA 1 103 IPR030671 GO:0005784|GO:0006886
Gma12g00627 107 MobiDBLite consensus disorder prediction 1 17 - -
Gma12g00627 107 Pfam Sec61beta family 56 95 IPR016482 -
Gma12g00627 107 MobiDBLite consensus disorder prediction 1 55 - -
Gma12g00627 107 PANTHER PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT BETA 1 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00627 Gma-Chr12 5230939 5231693 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00627 K09481 - gmx:100795313 151.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02920 13 43756110 43756837 Gma12g00627 12 5230939 5231693 PCT
Gma12g01616 12 36174141 36174847 Gma12g00627 12 5230939 5231693 PCT
Gma12g00627 12 5230939 5231693 Gma13g02920 13 43756110 43756837 PCT
Gma12g00627 12 5230939 5231693 Gma12g01616 12 36174141 36174847 PCT