Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00626 ATGGATACTGATGCCATTGGAGATCTTGTTGACAAGCTCAAGGCTATCCAGAATGACAATGTAGAAGATCAAGATCAAGATGATGATTTTGATGATGATGACGACGACGACGAAGAACATGAACCTATCACACTTGGTTTTGTTGATAAGCCCAAGAATAATTGGTCTCTTCGCCGTCAATATTTCCCAAGCAAAGCTGGAGGAGTCCCGGCTTGGCTTGACCCTCTGAATATACCATCAGGGGGATCATTTGTGTGTGACAATTGTGGAGACCCTTTACAATTCTTGCTTCAGGTTTATGCACCAACTGAGAAGGAAACTACATTTCACCGAATGTTGTTTGTTTTTATGTGTCCCTCCATGAAATGTCTTCTCAGGGATCAGCATGAGCAATGGAAACGCCATCCAGAGAAGCCATCTAAAAGTTTGAAGGTTTTCCGTTGTCAATTACCTCGCGCTAATCCATTTTACTCACCTGAATGCCCTCAGTATAATAAAAGCCACAAACCTGCTGGCAGTGGAGCCGCTCTTTGTGATTGGTGCGGCACCTGGAAAGGAGACAAGCTTTGTAGTGGTTGCAGACAAGCACGATATTGCTCTGAGAAACACCAGGTTATGAGTTGGCGCACAGGGCATAAAATTGCTTGCCAGCAGATGAAAGTTTCTTCACCTGTTTCTGGACCCAACAAAAGTGGAACCGCCTCCTTGGATTCTCATAAAGTTGGAAGCAAGAATCTATGGCCTGAATTTGAGATCACCATTGAAGATGAAAGTGACTATAAGAGAGACATGTCTGAGGAAAATACCTTAGCTAATTCCTTGATTTCAAGGAACAGGACTGATGACACAATGAATTCACTTTTGGATAACTTTCAGGGTGATGATGACAAAAAGAGTTGGGCCTCCTTCCAGCAATGCATTGCCAAGGCCCCAGAACAAGTGTTGAGGTATTATAGGAATACTAATGCTAAGCCAATATGGCCTGTTTCAAGTGATCTGCCATCAAATGCTGATATCCCTAGTTGTAGTTACTGCACCGGACCTATGTGTTGTGAATTTCAGATTTTGCCACAACTGTTGTATTACTTCGGCGTTGACAATGAAAATGGACTCTCTGGATTAGGCTTCAATTGTGGTGTATGCATGTGA 1149 0.4299 MDTDAIGDLVDKLKAIQNDNVEDQDQDDDFDDDDDDDEEHEPITLGFVDKPKNNWSLRRQYFPSKAGGVPAWLDPLNIPSGGSFVCDNCGDPLQFLLQVYAPTEKETTFHRMLFVFMCPSMKCLLRDQHEQWKRHPEKPSKSLKVFRCQLPRANPFYSPECPQYNKSHKPAGSGAALCDWCGTWKGDKLCSGCRQARYCSEKHQVMSWRTGHKIACQQMKVSSPVSGPNKSGTASLDSHKVGSKNLWPEFEITIEDESDYKRDMSEENTLANSLISRNRTDDTMNSLLDNFQGDDDKKSWASFQQCIAKAPEQVLRYYRNTNAKPIWPVSSDLPSNADIPSCSYCTGPMCCEFQILPQLLYYFGVDNENGLSGLGFNCGVCM 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00626 382 MobiDBLite consensus disorder prediction 16 42 - -
Gma12g00626 382 Pfam Programmed cell death protein 2, C-terminal putative domain 298 376 IPR007320 GO:0005737
Gma12g00626 382 SUPERFAMILY HIT/MYND zinc finger-like 176 220 - -
Gma12g00626 382 PANTHER PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED 22 369 - -
Gma12g00626 382 Pfam MYND finger 178 216 IPR002893 -
Gma12g00626 382 ProSitePatterns Zinc finger MYND-type signature. 178 216 IPR002893 -
Gma12g00626 382 MobiDBLite consensus disorder prediction 22 42 - -
Gma12g00626 382 Gene3D - 163 222 - -
Gma12g00626 382 ProSiteProfiles Zinc finger MYND-type profile. 178 216 IPR002893 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00626 Gma-Chr12 5225115 5228352 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00626 K14801 - gmx:100796200 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00626 12 5225115 5228352 Gma11g01358 11 11824529 11825425 GST