Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00617 ATGAAGCAAGCAACTCTTTTCTCCTTCTCACTCTTCCTACTCCTTTCCTCCACCACCATGGCCATTTCACCAGCACCTGCAGCAGCACCAAAAACACCTCCTACCCCAAAGGCAACAGCACCATCACCAAAACCATTAGTTCCCACACTACCTCAGTCTCCAGACTCTCCTGACTCAGTCCCCGACGACATCACCAGAATCCTGAAAAAGGCAAAAATGTTCTCAGTCCTAATCCGCCTCCTCAAAACCACAGAAATCATGAACAACATCAACTCACAGCTCATAACAGCCAAGAGTGGCGGCATAACCATCCTTGCACCAGATGATTCTGCCTTTTCCAACCTCAAAGCAGGCTTCCTCAACTCCCTAAACGAAGGCCAGAAAATCGAATTAGTGCAGTTCCACATATTGCCAGAGTTTGTGTCGAGCTCAAACTTCGATTCCCTAAGCAACCCTGTGCAGACAGTGGCTGGTAAAGACCCTGCAAGGCTTCCGCTGAATGTGAATGCATTAGGTAACAGTGTCAACATTTCAACTGGGGTAGTCAATGCCACCATTCTCGGAGTAGTCTACTCGGATAACAAGCTTGGCATTTATCATGTGGACAAGGTTCTTCTTCCTCTAGATTTCTTTCTAACCAATAAGGCTCCAGCTTTGGCTCCAACAACTCTTGCAAAGGCTCCTAAAGCTGCCAAGGAAAACTCTTCTGACGATGATCAAGAAGAAACAGACCAAAATCACAATAAATCCGGGGCAGTGAGTTTGGTTAGCCTTGGTGGAGCAATGTTGATGTCGATTGGGATAGCTTTGGTCACAGTGGCAACCATGTGGAGTTGA 837 0.4695 MKQATLFSFSLFLLLSSTTMAISPAPAAAPKTPPTPKATAPSPKPLVPTLPQSPDSPDSVPDDITRILKKAKMFSVLIRLLKTTEIMNNINSQLITAKSGGITILAPDDSAFSNLKAGFLNSLNEGQKIELVQFHILPEFVSSSNFDSLSNPVQTVAGKDPARLPLNVNALGNSVNISTGVVNATILGVVYSDNKLGIYHVDKVLLPLDFFLTNKAPALAPTTLAKAPKAAKENSSDDDQEETDQNHNKSGAVSLVSLGGAMLMSIGIALVTVATMWS 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00617 278 ProSiteProfiles FAS1/BIgH3 domain profile. 61 205 IPR000782 -
Gma12g00617 278 MobiDBLite consensus disorder prediction 231 246 - -
Gma12g00617 278 SUPERFAMILY FAS1 domain 40 208 IPR036378 -
Gma12g00617 278 MobiDBLite consensus disorder prediction 224 249 - -
Gma12g00617 278 Gene3D FAS1 domain 49 207 IPR036378 -
Gma12g00617 278 MobiDBLite consensus disorder prediction 25 62 - -
Gma12g00617 278 Pfam Fasciclin domain 73 207 IPR000782 -
Gma12g00617 278 PANTHER FASCICLIN DOMAIN PROTEIN 4 278 - -
Gma12g00617 278 MobiDBLite consensus disorder prediction 27 55 - -
Gma12g00617 278 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 4 278 IPR045003 -
Gma12g00617 278 SMART fasc_3 103 208 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00617 Gma-Chr12 5160956 5161792 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00617 - - gmx:106794109 461.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00617 12 5160956 5161792 Gma12g00617 12 5160956 5161792 ECH