Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00616 ATGAAGGATGTTTTGTTCTCCCTCTTACTTTTCATGTCTTTTTGCTCCGTATATTTAACCACAACATTAGCCCAAGCACCTGATACAGCCCCATCAAAACCAATTGTCCAAACACTACCCCAGTCACCCTCTTCAGATACCTCTGATTCTTCCCCTGATGACATCATCAGAATATTAAGGAAGGCCAAATCGTTCAACGTCCTAATTCGCCTACTGAAAACCACCCAATTGATCAACCAAATCAACGCTCAGCTCATAACCATAAGATCAGGTGGCTTAACCATCTTTGCACCAGATGATGGTAGCTTTTCACAACTCAAAGCAGGATTCCTCAACTCTCTGGCCGACAATCAAAAGATCGAACTTCTTCAGTTCCACGTTCTTCCCACTTATGTTTCAAGTTCAAACTTCGATTCGCTGAGCAACCCCGTGAGAACTCTGGCTGGGGATAACCCCGGCAGGTTGCAACTAAACGTGACAGCATATGGCAACAATGTGAATATCTCAACAGGAGTGGTTAATGCCACGGTCACAGGAGTTGTATACTCAGATAAGGTGCTTGCAATATATCATGTGGACAAGGTGCTTCTTCCTTTGGATTTCTTCAAGCCTAAGCCACCAGCTCCTGCTCCCTCTCCTGCAATGGCACCAAAAGCTGATAATGATAACTCATCTGCTGATGCTCGCCTTGGAACATCCAAAGACAGCGCTGGAGCGTGCAGTTTGGTAAGTGCTCAAGGAACATCGTTGGTGTCCCTTGGAGTTGCTTTAGTTGCCTTGGTGATTATTTCAAGTTGA 798 0.4511 MKDVLFSLLLFMSFCSVYLTTTLAQAPDTAPSKPIVQTLPQSPSSDTSDSSPDDIIRILRKAKSFNVLIRLLKTTQLINQINAQLITIRSGGLTIFAPDDGSFSQLKAGFLNSLADNQKIELLQFHVLPTYVSSSNFDSLSNPVRTLAGDNPGRLQLNVTAYGNNVNISTGVVNATVTGVVYSDKVLAIYHVDKVLLPLDFFKPKPPAPAPSPAMAPKADNDNSSADARLGTSKDSAGACSLVSAQGTSLVSLGVALVALVIISS 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00616 265 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 262 IPR045003 -
Gma12g00616 265 Pfam Fasciclin domain 64 198 IPR000782 -
Gma12g00616 265 MobiDBLite consensus disorder prediction 208 232 - -
Gma12g00616 265 PANTHER FASCICLIN DOMAIN PROTEIN 1 262 - -
Gma12g00616 265 Gene3D FAS1 domain 30 198 IPR036378 -
Gma12g00616 265 ProSiteProfiles FAS1/BIgH3 domain profile. 52 196 IPR000782 -
Gma12g00616 265 SMART fasc_3 94 199 IPR000782 -
Gma12g00616 265 SUPERFAMILY FAS1 domain 51 199 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00616 Gma-Chr12 5157101 5158212 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00616 - - gmx:100791112 414.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00616 12 5157101 5158212 Gma11g01658 11 17934822 17935632 GST