Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00586 ATGTCGGTGAGTTCCAGCTCCAGGGGAAGAATAACGACGGAGCTTCAAGTCCCCAAGAAATGGACAGAGAGAGAAACAAGTCCTGAGAGAACCAAGGTTTGGGCCGAGCCCAAGCCCAAGCCCAAAACGCCCAGAAAAGTTTCCGTCGTTTACTACCTCTCCCGAAACGGCCAACTCGAGCACCCTCACTTCATGGAGGTTCCTCTCTCTTCGCCTCACGGACTCTACCTCAAAGACGTTATCAACCGCTTGAACGCTCTCCGAGGGAAGGGCATGGCCACCTTGTACTCCTGGTCCGCTAAACGGAGCTACAAAAACGGCTTCGTTTGGCATGACTTGTCGGAGAACGATTTCATCTACCCGACGACGCAAGGGCAAGACTACATTCTCAAAGGATCGGAAATTGTGGAGCACAATGTTACCGGCGCCGGCGCGAGGGTTAACAAATCGGAGGAAGAATCCGATTCGCCGGTGGTGATCACGAGGCGGCGGAACCAGTCGTGGAGCTCAATCGATATGAACGAGTACCGAGTTTACAAGTCCGAATCGTTCGGTGACTCGGCTGGGAGAATCGGCGCCGACGCGGCGACTCAGACGGAGGAGAAGCGGAAGCGGAGGAGGGCGGGGAGGGAGGGAGAAGCGGTGGAGATTCAAGAGAAGAACGATGGAATTGAAGCGGGAATGGAGGGAGAGAGGGTCGCGCACGTGACTTGTGATGATGATAATAATAACCACACTACGGAGCTGAGTAGGGAGGAGATCTCGCCTCCACCGTCGGATTCGAGCCCCGAGACGCTGGAGACGCTGATGAGGGCGGATGGACGGCTCGGATTACGGTCTTCGGAATCCGAGAAGGAGAATCTGACGGTGGAGAGCTGTCCTAGTGGGAGGACGAGAGCTTCGTCTGTTTTGTTGCAATTGTTATCGTGCGGTGCGGTGTCGTTTAAGGAGTGTGGGGCCAACGCGGTGAAGGATCAAGGGTTCTCGTTGGTTGGGCACTACAAGTCCAGGATGCCCCGCGGAGCAGGGAATCATTCGGGAAACGAAACGGGGACATCGATGGAAATTCCAGATTTGAGCAGGGTGAGGTTGGAAGACAAAGAATATTTTAGTGGGAGCTTGATAGAAACCAAGAAAGTGGAAACCCCTGCTTTGAAGAGGTCATCTTCTTACAATGCAGATAGTGGTTCCCGGTTGCAAATAGTGGAGCATGAAGGAGAAGCTGTGCGGGCAAAGTGCATACCTCGGAAGTCTAAGACACTACCAACAAAAAAAGAAGAGGGTGCTTCCATGCATATTGTTGTCAGTAGCCAACATGGGAGCAAAAGATTCGACACACAACAATAA 1347 0.5316 MSVSSSSRGRITTELQVPKKWTERETSPERTKVWAEPKPKPKTPRKVSVVYYLSRNGQLEHPHFMEVPLSSPHGLYLKDVINRLNALRGKGMATLYSWSAKRSYKNGFVWHDLSENDFIYPTTQGQDYILKGSEIVEHNVTGAGARVNKSEEESDSPVVITRRRNQSWSSIDMNEYRVYKSESFGDSAGRIGADAATQTEEKRKRRRAGREGEAVEIQEKNDGIEAGMEGERVAHVTCDDDNNNHTTELSREEISPPPSDSSPETLETLMRADGRLGLRSSESEKENLTVESCPSGRTRASSVLLQLLSCGAVSFKECGANAVKDQGFSLVGHYKSRMPRGAGNHSGNETGTSMEIPDLSRVRLEDKEYFSGSLIETKKVETPALKRSSSYNADSGSRLQIVEHEGEAVRAKCIPRKSKTLPTKKEEGASMHIVVSSQHGSKRFDTQQ 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00586 448 MobiDBLite consensus disorder prediction 419 448 - -
Gma12g00586 448 MobiDBLite consensus disorder prediction 249 265 - -
Gma12g00586 448 MobiDBLite consensus disorder prediction 1 41 - -
Gma12g00586 448 MobiDBLite consensus disorder prediction 17 41 - -
Gma12g00586 448 PIRSF UCP031043 12 438 IPR021182 -
Gma12g00586 448 PANTHER OS01G0839200 PROTEIN 11 418 - -
Gma12g00586 448 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 11 418 IPR010369 -
Gma12g00586 448 MobiDBLite consensus disorder prediction 196 248 - -
Gma12g00586 448 MobiDBLite consensus disorder prediction 187 265 - -
Gma12g00586 448 MobiDBLite consensus disorder prediction 434 448 - -
Gma12g00586 448 Pfam Protein SOSEKI, plant 47 395 IPR010369 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00586 Gma-Chr12 4909684 4914668 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00586 - - gmx:100779732 859.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00586 12 4909684 4914668 Gma12g00586 12 4909684 4914668 ECH
Gma11g01292 11 11019831 11023064 Gma12g00586 12 4909684 4914668 ECH
Gma12g00586 12 4909684 4914668 Gma11g01292 11 11019831 11023064 GST